Coffea arabica (coffee): 113708025
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Entry
113708025 CDS
T11342
Name
(RefSeq) U1 snRNP-associated protein usp106
KO
K13212
RNA-binding protein Luc7-like
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113708025
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113708025
SSDB
Ortholog
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GFIT
Motif
Pfam:
LUC7
Motif
Other DBs
NCBI-GeneID:
113708025
NCBI-ProteinID:
XP_027086259
UniProt:
A0A6P6U724
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Position
9c:39794900..39803444
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AA seq
414 aa
AA seq
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MDAIRKQLDVLMGANRNGDVREVDRKYYDRDVCRLFLSGLCPHELFQLTKMDMGPCPKVH
SLQLRKEYEESKAKGTDNYDRDLEDVIDRLIVECDRKIARALKRLDDEDAKAAIAISVSE
VTQTPEILELSKQIKEKLKEADQYDLEGKTDMKIRALEVVEELRTKRADKQSMLLLDAFN
KDRASLPQPLTNPPQLAPLPAATPDPRIQEMINEKLKKAEDLGEQGMVDEAQKALEEAEA
LKKLPARQENVADSAKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
MQIREKLAELQEERNKKRKAHEEERRSRERISRDRDREPSKDVERGDSRDRGRDHDRQSR
DRDRDYDRNRGYDRERDRERDRSRSYDSRSRRRSRSRSRERSRDYDRHRRSDRY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgataaggaagcaactcgatgtcttaatgggagcgaaccgaaacggcgacgtc
agggaggtggatcgcaagtactacgaccgtgacgtctgccgtcttttcctctctggcctg
tgccctcatgagctctttcaactcactaaaatggatatgggaccatgcccaaaggtgcat
tcgttgcagctgaggaaagagtatgaggaatcgaaggcaaaaggtactgacaactatgat
agggacttggaggatgtcattgatagacttattgttgagtgtgaccggaaaattgctaga
gctcttaaaagacttgatgatgaagatgctaaggctgctattgccatctcagtatccgaa
gttacgcagacaccagagattctagaattatcaaaacaaatcaaggagaagctgaaagaa
gctgatcaatatgatcttgaaggcaagacggatatgaagattagagctcttgaagtggtg
gaagagctcaggactaaaagagcagacaaacagtcgatgctacttttggatgctttcaac
aaggatcgagcttcgctacctcagcctcttacgaaccctccccaattggcacctttgcct
gctgctactcctgatcctcgtatacaggaaatgataaatgagaagctaaagaaagctgag
gatcttggtgaacaaggaatggttgatgaagcacagaaagcattggaagaggctgaggca
cttaagaagcttccagcacggcaggaaaatgttgcggattctgctaaatatactgctgct
gatgtgcgaattactgatcaaaagctacgtgtctgcgacatatgcggagcatttttgagt
gtttatgacagtgatcgccgtttagctgatcattttggaggaaagcttcacttaggctat
atgcaaatccgcgaaaagttggccgagcttcaggaagagagaaacaagaagcgaaaagcc
catgaagaagagaggagatcaagagagcgcataagtcgggatcgtgacagggaacctagc
aaggatgtggaacgaggtgacagccgtgaccgagggagggatcatgatcgacagagcaga
gaccgagatcgagattatgatcgtaatcgtggttatgatcgcgagcgtgatagagaaaga
gatcgttctcgcagctatgattcaaggagtcgccgcagatcacgctcccgatcaagggaa
cgttctagagactatgatcgccacaggcgctctgaccgttactag
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