Coffea arabica (coffee): 113708173
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Entry
113708173 CDS
T11342
Name
(RefSeq) syntaxin-71
KO
K08506
syntaxin of plants SYP7
Organism
carb Coffea arabica (coffee)
Pathway
carb04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113708173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113708173
Membrane trafficking [BR:
carb04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
113708173
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Ran-binding
DUF5089
NPV_P10
Spc7
MDFI
Dna2
TBCC_N
Motif
Other DBs
NCBI-GeneID:
113708173
NCBI-ProteinID:
XP_071928744
UniProt:
A0ABM4WAB7
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Position
1e:complement(47129635..47131738)
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AA seq
264 aa
AA seq
DB search
MSVIDIVFRLDDICKKYEKYDVEKQRSLKTSSEDAFARLFASFESQIEAALQKSEMAAME
TSRAKVVAMNAEVRRVKARLMEEVPKLQKLAQKKVKGITKEELEIRYDLVLALPERIRAI
PDGTSSAAKQTGGWGASASKRNIKFDSGYTDGHFGDDFFQQSEESSQFREEYEMRKLKQD
QGLDVISEGLDTLKNLAQDMNEELDRQVPLIDEIDTKVDKATSELKNTNVKLKHKITEIR
SSQNMCIDIILLCILLGIAAYLYK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgatagatattgtgttcagactcgacgacatatgcaagaaatacgagaaatac
gacgttgaaaagcagcgttccctcaagacctcctctgaggatgcctttgctcgcctcttt
gcttccttcgagtcccaaatcgaagctgctctccagaagtcggagatggctgcaatggag
acaagcagggcaaaggtggtggctatgaatgctgaggttcggcgcgtaaaggccagatta
atggaagaggttcctaaattgcagaaactcgcccagaagaaggtcaaggggatcacaaag
gaagaactagagattcgttacgatctggttctagcattaccggagaggattcgtgccata
ccagatggaacttccagtgctgcaaaacaaacaggaggttggggtgcttcagcgtctaaa
agaaatattaaatttgactcaggttatacagatgggcacttcggtgatgatttctttcaa
caatctgaagaatcaagccaatttagggaagagtatgaaatgcgcaaactaaaacaggat
caaggtttagacgttatctcagaaggtctggatacactgaaaaatctggctcaagatatg
aatgaggagctggataggcaagttcccttaattgatgaaattgacactaaggtggacaaa
gcaacatctgagctcaaaaacacaaacgttaaactcaagcacaaaataactgagattagg
tccagtcaaaacatgtgtatcgacatcattcttttatgtattcttctcggaatcgctgcc
tacttgtacaagtga
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