Coffea arabica (coffee): 113708562
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Entry
113708562 CDS
T11342
Name
(RefSeq) calcium permeable stress-gated cation channel 1-like isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
113708562
Transporters [BR:
carb02000
]
Other transporters
Pores ion channels [TC:
1
]
113708562
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
113708562
NCBI-ProteinID:
XP_027086835
UniProt:
A0A6P6U9D4
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Position
9c:complement(42226474..42237868)
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AA seq
769 aa
AA seq
DB search
MATLGDMGLSAAINILSALVFLVAFAILRLQPFNDRVYFPKWYLKGLRSSPTRSGAFVTR
FVNLDWRSYLRFLNWMPDALRMPEPELIDHAGLDSAVYLRIYLLGLKIFVPVTLIAWTIL
VPVNWTNHTLAKSDVNYSEIDLLSISNIPLGSQRFWAHTVMAYAFTFWACYILQQEYAKV
ARMRLHFIASEKRRPDQFTVLVKNVPPDPDESISETVEHFFLVNHPDHYLTHQVVCNANK
LAKLVKEKKRNQNWLDYYQLKYARNQSQRPMMKTGFLGLCGEKVDAIDHQTAEIERLSKE
IPEERERVINDPKSIMPAAFVSFKTRWGAAVCAQTQQSSNPTLWLTEWAPEPRDVYWPNL
AIPYVSVSIRRLIIGVAFFFLTFFFMIPIAFVQSLANIEYIEKKAPFLKPLIEIKFIKSF
IQGFLPGIALKIFLILLPTILMIMSKFEGFLSISGLERRSASRYYIFNIVNVFLGSIIAG
TAFQQLNKFIHQSANEIPKTIGVAIPMKATFFITYIMVDGWAGIAAEILRVRPLIIFHLK
NFFMVKTEKDRDEAMDPGSLGFDTGEPQIQFYFLLGLVYAVVTPILLPFILVFFGLAYVV
FRHQIINVYNQEYESAAAFWPDVHGRIISAMVISQLLLMGLMSTKHAALSTPFLLALPIL
TISFHLYCKGRYEPAFRRYPLQEAMMKDTLERAKEPNLNLKAYLQNAYIHPVFKGGDDDD
EDEDEIFEKLEATVLVPTKRQSRRNTPVPSKVSGDSSPSLPDLQEKGRP
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcttggggacatggggctttcggctgcaattaatattctcagtgcattggtt
ttcttagtagcatttgccattttacggcttcaaccattcaatgatagagtgtatttccca
aagtggtatcttaagggtttgagaagcagtccaacacgctctggggcatttgtaacgaga
tttgtgaatttggattggagatcatatctaaggtttttgaattggatgcctgatgcactg
agaatgccagaacctgagcttattgaccatgcgggattggattctgcagtttatttgcgg
atttatttactggggctcaaaatctttgttcctgtgacattgattgcatggacaatcctt
gtgccagtgaactggacaaatcacacattggctaaatcagatgtaaattacagcgagatt
gatctgctctctatttcaaatattccacttggatcacaaaggttctgggctcatacggta
atggcctatgccttcactttttgggcatgctatattttacaacaagaatatgcaaaagtt
gcacgcatgcgtctgcactttattgcctctgaaaagcgacggcctgatcagtttacagtc
cttgttaaaaatgtaccaccagacccagatgaatcaattagtgaaactgttgagcacttt
ttccttgtgaaccatccagatcactatcttactcatcaggttgtatgcaatgccaacaaa
cttgcaaaattggtgaaggaaaaaaaaagaaaccaaaactggcttgactattaccaattg
aaatatgctcgaaatcaatcacaacggcccatgatgaagactggttttcttggcctttgt
ggtgaaaaagtggatgcaattgatcatcagacagcagaaattgaaagattatcaaaagaa
attcctgaagaacgagaaagagttataaatgatccaaagtctattatgcctgcagcattt
gtctcctttaaaactaggtggggtgctgctgtttgtgctcaaacacagcaatcaagtaat
ccaactttatggttgacggaatgggctcctgagccacgcgacgtgtactggccaaacttg
gccattccttatgtttcagtatcaatcaggaggctcataattggtgtcgctttctttttc
ctcactttctttttcatgatacccatcgcgtttgtgcaatcccttgcaaatattgaatat
attgagaaaaaagcaccatttttgaagccattaattgagattaagttcatcaagtcattt
atccaaggttttctacctggaattgccctgaaaatcttcctcatactgctgccaactatc
ttgatgataatgtccaaatttgaaggctttctgagtatatcaggattagagaggagatca
gcatctagatattatattttcaacattgtgaatgttttccttggcagtataattgcagga
actgcatttcaacagcttaataaatttattcaccagtcagcaaatgaaatcccaaaaaca
attggtgtggctattccaatgaaagcaacttttttcataacttatataatggttgatgga
tgggctggtatcgctgcagagatcttaagggtgaggcctttgataattttccacctgaag
aactttttcatggtgaagactgagaaagaccgagatgaagcaatggatcctgggagtctt
ggtttcgacactggggaaccccaaatacagttttattttctactaggccttgtgtatgct
gtcgtgacaccaattctacttccattcatactggttttctttggcctggcatatgttgtg
tttcgtcatcagatcataaacgtgtataatcaagagtatgaaagtgctgcagctttttgg
ccagatgttcatgggcgtatcatttctgccatggtcatctcgcagctacttctaatgggg
ctgatgagtacaaagcatgctgctctgtccacaccgttccttcttgcgctcccaattctg
accatttcgttccatttatactgcaaaggccgttatgaaccagctttccgcagatatccc
ttacaggaagcaatgatgaaagatactctggagcgggcaaaagaaccaaacctgaacttg
aaggcctacctccagaatgcttatattcatcctgttttcaaaggtggagatgatgatgat
gaggatgaggatgaaatctttgaaaagttggaagcaactgtgctggtgcctacaaaacgg
cagtcgcggaggaacacacctgtccctagcaaagttagtggtgactcttcgccatcattg
ccggatcttcaagaaaaaggacgtccttaa
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