Coffea arabica (coffee): 113708592
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Entry
113708592 CDS
T11342
Name
(RefSeq) KH domain-containing protein At4g18375 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113708592
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
113708592
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_NusA_2nd
KH_PNO1_2nd
KH_Vigilin
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
113708592
NCBI-ProteinID:
XP_027086886
UniProt:
A0A6P6U9H0
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Position
9c:complement(20591935..20599633)
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AA seq
621 aa
AA seq
DB search
MGEFGKRPWKDDGDSKNQKRRTERDQKGNDELIVYRILCPDNVIGSVIGKSGKVINSIRQ
ETRAKVKVVDPFPGANDRVITIYCYVKEKEDVEIDDEFNEKQPLCAAQDALLKVHFAIAN
AIASVGESDNKKRKDKEECQILVPSSQSANIIGKSGSTIKKLRSKTKTNIKITAKDTSDP
THSCALDFDNFILISGESEAVKKALFAISAIMYKFSPKEDIPLDTTIPEAPPSIIIPSNV
PIYPAAGLYPSVDPIVPHRAVPSVLDPGHVPEFPGYTETGSTFPVYSSALPVVSGYGSDV
KSEELTTRVLCPSSKIGRVIGKGGSSIKSVRQASGARIEVEDAKANRDDCLITVISTESS
DDQKSIAVEAVLLLQAKINDEEDDTVTMRLLVPSKVIGCIIGKGGLIINEIRKRTKADVH
ISKDEMPKCADADDELVEVVGEVCSVRDALIQIVLRLRDDVLKGNEGVRHPSGGFDSVYC
GAAGLPVPSMLPNVPSVAPLTYDQRAETGAGVSMLSSSSLYGYGSFPIGDNSYGSLPTYS
SKVYGGLPQSSALEMVVPAHAVGKVMGKGGMNLENIRKISGATIEIPESKSSRGDRVAVI
SGTSEQKRAAENLIQAFIMAT
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtttgggaagcgtccatggaaggatgatggtgatagtaagaaccagaaaagg
aggactgagagagaccagaagggtaacgatgagttgattgtatataggattttatgtcca
gataatgttataggaagtgtaattggaaagagtgggaaagtgataaattccattagacaa
gagacaagggcaaaggttaaggttgtggatccttttcctggggctaatgatagagttata
acaatttattgctatgttaaggagaaggaagatgtggagattgatgatgaattcaatgaa
aagcaacctctctgtgctgctcaggatgcacttctcaaggttcactttgcaattgcaaat
gctatcgcatcagttggcgagtctgacaataagaagcggaaagataaggaggaatgccaa
attcttgttccgtcaagccaatctgcgaacattattgggaaatctggaagcacaatcaag
aagctcagaagcaagacaaagacaaatattaagattacagcaaaggatactagtgatcca
actcattcttgtgctttggattttgacaactttattctgatatctggtgaatcagaggca
gtgaagaaagcactttttgcaatttcagcaatcatgtataagtttagtcccaaggaagat
atacctcttgatactaccataccggaagctcctccaagtatcattatcccttcaaatgtt
cctatctaccctgctgctggactgtaccctagtgtagatcctattgtgccacacagagct
gttccttctgttttagatcctggacacgtacctgagtttccaggttatactgaaactggg
agtacatttcctgtctattcatctgctcttcctgtagtttctggttatgggagtgatgtt
aaatctgaggaattgactacaagggtgctctgcccatctagtaagattggccgtgttatt
ggtaaaggaggaagttccattaaaagtgtaaggcaggctagtggtgctcgtattgaggta
gaagatgccaaggccaatcgtgatgactgtctcatcactgtcatctcaacagagtcatca
gatgatcagaaatccattgcagttgaggctgtattgttgttgcaagccaagattaatgat
gaggaagatgacactgtgaccatgcgtcttcttgttccctctaaggttattgggtgtatt
attggaaaaggtggtttgattataaatgaaattaggaaaagaactaaagcagatgtacat
atctccaaagatgagatgccaaaatgtgccgatgctgatgatgaactcgttgaggtggtt
ggcgaagtttgtagtgtcagggatgcactgattcagatagttttgaggcttcgtgacgat
gtcttgaagggcaacgaaggagttcgtcatccttctggtggttttgattctgtttactgt
ggtgctgctggccttccagtaccctcaatgctgcccaatgttccttcagttgctccttta
acttatgatcagagagctgaaactggggctggggttagcatgctctcatcaagtagcctc
tatggttatggttcatttccgattggagacaatagttatggttctttgcctacatattca
tcaaaggtttatggagggttgcctcagtcctctgctttggagatggttgttcctgcacat
gcagttggcaaagtcatggggaaagggggaatgaatctcgagaatattcgtaagatatct
ggagcaactatagagatcccggaatcgaaatcctctaggggcgatcgcgtggctgtaata
tctggtacatcggaacaaaagcgtgcagctgaaaacttgattcaggcatttataatggcc
acataa
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