Coffea arabica (coffee): 113708605
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Entry
113708605 CDS
T11342
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113708605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113708605
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113708605
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113708605
NCBI-ProteinID:
XP_027086915
UniProt:
A0A6P6U837
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Position
9c:42748596..42754691
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AA seq
477 aa
AA seq
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MEMESGKLFIGGISWDTDEKRLREYFEAFGDVVEAVIMKDRNTGRARGFGFVVFANAYVA
ERVVKEKHVIDGRTVEAKKAVPRDDQQNLSRSNGSIQGSPSPARTKKIFVGGLPSTVNES
DFKKYFEQFGTITDVVVMYDHNTKRPRGFGFITYNSEEAVDRVLHKTFHELNGKMVEVKR
AVPKELSPGPIRSNLSGYGHGLNRVNNFPNAYPQGYSPSSMAGFGMRMDGRFSPVTVGRS
GYLPFSSSNYAMGPNLDSGLSSDFGGSGSYSPNIGYGRGLNPIQSVYSNRFSGPVGYGVG
IGGSGSLVNSASRNMWANGGINYDSKTVNSNDFVGSGSGNTELLGAFGTIGAIWGSSPGS
GQGGGNGSFSSSSINYGNGEDSFMAGAGYGKVSGSNVDTNASYAARSDTHDMAFGNLYGS
GSIYDEPAWPSSSPELASSGTFSYRLGDTTSNVTPSNSVGYVGGYSVASRSNRGIAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagtctggcaagttgttcattggtgggatttcttgggacaccgatgaaaaa
cgcttgagagagtatttcgaagcttttggcgacgtggtggaagctgtgatcatgaaggat
cggaacacgggccgcgcccgtggtttcggttttgttgtttttgccaacgcttatgttgca
gaaagagttgtcaaggaaaagcacgttatagatggcagaactgtggaggcaaagaaagct
gttcccagagatgatcaacagaatctaagcaggagcaatggcagtattcagggatcaccc
agtcctgctcgcacaaagaagatttttgtaggaggtttaccatccacagtcaatgagagt
gacttcaagaagtactttgagcagtttggtacaatcacggatgttgtggtgatgtatgat
cataacacgaaaaggcctagaggttttggttttatcacttacaattcagaggaagcagta
gatagggttttgcacaaaactttccatgagcttaatggcaaaatggttgaggtcaagcgg
gctgtacccaaggagctatctccagggccaataagaagcaacttaagtggctatggtcat
ggtttgaatagagtcaacaactttcctaatgcctaccctcaaggatatagcccgagctcg
atggctggttttggaatgagaatggatggaagatttagtccagttactgttggtcggagt
ggatatctaccctttagttcctctaattatgctatgggaccaaatttggattcaggcttg
agttctgattttgggggaagtgggagttatagtcctaacataggttatggacgtggtttg
aaccctattcagagtgtgtattcaaacaggtttagtggtccagttgggtatggtgtaggc
attggtggaagtggttctctggtgaactcagccagtcgaaacatgtgggctaacgggggt
ataaattatgatagcaagactgtaaattcaaatgatttcgttggatctggaagtgggaat
accgaattgcttggtgcttttggaactattggagcaatttggggttcctctcctggctca
ggtcaaggtggaggaaatggttcttttagcagcagtagcattaattatggcaatggagaa
gacagctttatggctggggcagggtatggaaaagtcagtggaagcaatgttgacacgaat
gcatcatatgctgcaagaagtgatacacatgatatggcttttggaaacttgtatggtagt
ggttcaatatatgatgagcccgcatggccatcatcatcgccagagttggcaagctctgga
acctttagttataggcttggggataccacttcaaatgttacacccagcaactctgttggt
tatgttggtggttatagtgttgcaagtagatctaatagaggaattgctgcctag
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