Coffea arabica (coffee): 113708827
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Entry
113708827 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113708827
Spliceosome [BR:
carb03041
]
Common components
Common spliceosomal components
General mRNP proteins
113708827
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
Motif
Other DBs
NCBI-GeneID:
113708827
NCBI-ProteinID:
XP_071921056
UniProt:
A0A6P6UEP8
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Position
9c:43512983..43522134
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AA seq
647 aa
AA seq
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MRELKDENGSVVIIDGVFASSHEWRIKKSEPNKMSLPGFSQMEFDEFDDYSEKTAENPET
SNGGDQVDKSGGGQDPIKRPMHKSDHHHHQRVKRSRTREEFHEDEEERSSSYRLHSPSRD
RERSGRERYRSSRESKDRDKHKSSKKERDGDKIKESDRERDTNKGEDSGRRGRGREDERQ
RGRERNQDLSNRTSHSERHLVDGEREESRDREKNGDREYGGRERQSQLQEGDRESRRFKE
KKEEVAEPQADPEHDRRTVFAYQISLQADERDVYEFFSRAGKVRDVRLVVDRISRRSKGI
GYIEFYDVMSVPMAVALSGQPLLGQSVMVKPSEAEKNLVQSTASVAAGDTDLRCPYSGGA
RRLYVDNLHSNIKEDQLRQVFEPFGTVELVQLPPDLETGHSCRYGFVQFSRLEDARAALS
LDGQLDIAGRVMKVSAVTDQTLRQEVGANAGDFGDDEGGGLSLSAESLTLLMQKKLDHTR
ITSSGAGSVGSQVVDNPGLSAPAAPVLGAAPEVSPLAPFGQIPVPALAGWPAAGLSLPSV
TFPSIDTIGIPSECLLLKNVFDPKLESEPEFDQDIKDDVEDECSKFGKLKHIYVDKKSDG
LVYLRFENNQAAIAAQRALHGRWFAGKMILATFMVPQNYEVTFPQSK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagagagttgaaggacgaaaatggatcggtagtgataattgatggtgtctttgctagc
agccatgaatggaggataaaaaaatcagaaccaaacaaaatgagtttgccgggtttttcc
caaatggaatttgacgagtttgatgattactcggagaaaacagcggaaaatcctgagacg
agcaatggcggtgatcaagtggataaatctggcggaggccaagacccaattaagaggcca
atgcataaaagtgatcatcatcatcatcaacgcgttaagcgttcaaggacgcgggaagag
ttccatgaagacgaggaggagaggagctcaagctaccgtctccattccccttcaagagat
agagagaggagtgggagggagagatacaggagtagccgagaatccaaggacagggacaag
cataagagcagcaagaaggagagagatggggacaaaatcaaagaaagcgacagagaaaga
gataccaacaaaggcgaagatagcggaaggagaggtcgtggccgcgaagatgaaagacag
agaggtagggagagaaatcaagacctgtcgaatcgtacaagtcattcagaaaggcatctg
gttgatggagagagagaggagagccgagacagggagaagaatggtgatagggagtatgga
ggaagggaaagacagagccagttacaagaaggggaccgagaaagcaggagatttaaagaa
aaaaaggaagaagtggccgagccacaggctgatcctgagcatgatcgacggacagttttt
gcttatcagatttctttgcaggcagatgaaagagatgtctatgagttttttagcagagct
ggcaaggtcagagatgtacgcctcgtagtggaccgcatttctagacgctccaaaggcatt
ggatatattgaattttacgatgtcatgtcggtccctatggcggtagccctgtccggccaa
cctcttcttggtcaatcagtgatggttaaaccatcagaggctgaaaagaatctcgttcag
tcaactgcatctgtggctgctggagatactgacctaagatgcccgtactcaggtggagct
aggaggttgtatgttgacaatctgcattctaacatcaaagaagatcaacttcgtcaggtt
tttgaaccatttggtactgttgagttggtgcagctgcctcctgacctggagactgggcat
agctgccgctatggttttgtgcagttttctcgccttgaagatgctagagctgcactaagt
ttagatggacaactggatattgcaggccgagttatgaaggtatcagctgttacagatcaa
actttaagacaagaagttggtgcaaatgctggagattttggtgatgatgagggtggtggt
ctgtctctgagtgctgaatctctaacacttctcatgcagaagaagctggatcatactagg
ataacatcaagtggtgctggttctgttggcagccaggttgttgataaccctggcctttct
gcaccagcagctccagttcttggtgctgcccctgaggtatctcctcttgctccttttgga
cagattcctgttccagcacttgcgggatggcctgctgcaggtctctcactgccttctgtt
acttttccttcaattgatactataggcattccaagtgaatgtttattgttgaagaacgtg
tttgatccaaaattagagtctgaacctgagttcgaccaggatattaaggatgatgttgag
gatgaatgttcaaaattcggaaagttgaagcacatttatgtggataagaaaagcgacggg
ttggtgtacctgcggtttgagaacaatcaagctgcaattgctgcgcagcgtgcacttcat
ggtagatggtttgctgggaagatgatccttgcaacgttcatggtgccgcagaattacgag
gtcacgtttccccagagcaagtag
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