Coffea arabica (coffee): 113709106
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Entry
113709106 CDS
T11342
Name
(RefSeq) cysteine protease ATG4-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113709106
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
113709106
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113709106
03029 Mitochondrial biogenesis [BR:
carb03029
]
113709106
Peptidases and inhibitors [BR:
carb01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
113709106
Membrane trafficking [BR:
carb04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113709106
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113709106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
113709106
NCBI-ProteinID:
XP_027087647
UniProt:
A0A6P6UCK9
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All DBs
Position
9c:31464428..31476231
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AA seq
479 aa
AA seq
DB search
MKGSSDRIVSSKHSSIDSPRTVATSTSSEAGPSSRSIHKTSVWSGFLVSAFAIFNSYSEP
RGNKVSSAKNLGWTTALKRVVNSGSMRRILGLNKPGISSSRSDIWLLGTCYKVTDDDSIT
DPSQSEGFASFVEDFSSRVLITYRKGFAPIGDSKYTSDGNWGCMLRSSQMLVAQALLCHQ
LGRSWRKTVDQPMDQKYIKILHMFGDSELSAYSIHNLLEAGKNYGLSPGSWVGPYAMCRT
WETLYRSKKHDTPDEDLSSAIAIYVVSGDEDGERGGAPVICIDDITTHCVECLKGQVNWL
PIILLVPLVLGLDKLNTRYLPLLGATFSFPQSLGILGGSPGASTYIIGLQDDNAFYLDPH
EVQQAVDITRDNLEVDTTSYHSNILRHIRLDSLDPSLAIGFYCRDKSDFDDFCVRASELA
NRSNGAPLFTVTQSRKSSYPSSHNDNINNNAEFPLPGSYDMVPEGEPEGCAHEDDWQLL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttcctctgacaggattgttagttctaaacattcttcaattgattctccaaga
acagttgctacctcaacttcttcagaggcaggaccaagcagccgtagtatccacaagacc
tcggtgtggtcaggcttcttggtgtctgcttttgccatctttaacagttacagcgaaccc
agaggtaataaagtttcgtctgcaaaaaaccttggatggactacggccttgaagagagta
gtaaatagtggctcaatgaggagaatactaggactaaataagcctggcatttctagctca
aggagcgacatatggcttctaggtacctgttacaaagtcactgacgatgactcaataact
gatcctagtcaatctgaaggatttgcttcatttgtagaagatttctcgtcaagagtttta
atcacataccgcaaaggattcgcacccataggggactctaagtataccagtgatggtaac
tggggttgcatgctaaggagtagtcagatgcttgttgctcaggccttactttgtcatcaa
ttaggaagatcatggaggaaaactgtggaccagccaatggaccaaaaatacataaagata
ttgcacatgtttggtgactctgagttgtcagcttattccatccacaatcttcttgaagct
ggcaagaattatggtctttctcctggctcatgggttggcccatatgcaatgtgtcgtact
tgggaaacattatatcgcagtaagaaacatgatactccggatgaagatctttcatcagcg
attgctatatacgttgtttctggtgatgaagatggagaaagaggtggggctcctgtcatt
tgcattgacgatataactacacattgtgttgagtgcttgaaaggccaagttaattggctg
ccaatcattttgttggttcctttggttcttggactggataaactcaatacaaggtacctt
cctttgctgggagctacattctcttttcctcagagccttggcatattgggaggcagccct
ggagcttcaacatatattatcggcttgcaagatgataatgcattttatcttgatccacat
gaagttcagcaggctgtcgatattacgagggataatctggaagttgataccacctcttac
catagcaacattctgcgacatattcgtctcgactcgctagatccatccttagcaattgga
ttctattgcagagacaaaagcgactttgatgatttttgtgtacgggcctcagagctagca
aatcgatcaaacggtgctcctctatttacagtgacacagtcccgtaaatcttcctaccct
tccagtcacaatgataacatcaataataatgctgagtttccactacctggctcctatgat
atggtgcccgaaggtgaaccagaaggttgtgcacatgaagatgattggcaacttctttga
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integrated database retrieval system
