Coffea arabica (coffee): 113709251
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Entry
113709251 CDS
T11342
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113709251
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113709251
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-GeneID:
113709251
NCBI-ProteinID:
XP_027087775
UniProt:
A0A6P6UAI8
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Position
9e:complement(39130909..39132631)
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AA seq
411 aa
AA seq
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MNIKSKNVDHLPKCYSIFPLIPIYQIFSMAQSSHFLVLSRMLAIICCFSTFQALQIKSTP
DQDIGFNAIDTCWRKHGDWATNRQALADCAKGYGAGAQGGKNGATYVVTDPSDDPINPKK
GTLRYGAIQREPLWIVFQGDMNLKLKDVEIFVNSYKTIDGRGARVEIGNGPCLRINDVEH
VIVHGINFRKCLRGIPGLVRIDPDHLLNTSSNGVPDGDGIRILSSSHVWIDHCHFSNCAD
GLLDISHKSTAVTVSNNYFTQHDKAMLLGHSDKFPQDNKMYVTLVLNHFASGLTQRIPRV
RYGYVHVANNKYDEWGMYAIGGSSCPTILSQANYYRAKNDSDAKQVTRRISNDPGRKNWS
WNSKDDVFLNGAYFVSSGNVWTPNYSASQAFELAPGGSVPILTLHAGPLQL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaagtctaaaaatgttgatcatcttcccaaatgctattcaattttccctctc
atcccaatttatcaaatcttttccatggcacaatcaagtcatttcctagtgctttcacgg
atgctagccatcatttgctgtttctcgacattccaagcccttcagataaaaagtacccca
gatcaggacattggtttcaatgcgatcgatacttgttggagaaaacacggggattgggct
accaatcgccaagccttagctgattgtgccaaaggatatggagctggtgcccaaggaggt
aaaaatggtgccacatatgttgtcactgacccttcggacgaccccatcaaccccaaaaag
gggacactcagatatggggcaatccagagggaacctctttggatcgtctttcaaggggac
atgaacctaaaactgaaagacgttgaaatttttgttaatagttacaagactatagatgga
agaggtgctagagttgagattggaaatggaccttgccttagaatcaatgatgtggagcat
gttattgtccatggaatcaactttcgtaaatgtttgcgtgggatacctggattggttcgg
attgatcctgatcatcttcttaacacaagttctaatggagtacctgacggagatggcatt
agaatactttcatctagccacgtttggattgatcattgtcacttttctaattgtgccgat
ggtcttcttgacatatcccataaatcaactgccgtgactgtgtccaacaactatttcact
cagcatgacaaggcaatgctgttagggcattcggataagtttccccaggataacaagatg
tatgtcaccttggtattgaaccattttgcttctggactaacccaaagaattcctagagtc
aggtacggatatgttcatgtagcaaacaataagtatgatgaatggggaatgtatgctatc
ggtggcagctcgtgtccaacaatactgagccaagccaactattacagagcgaaaaatgat
tctgatgctaaacaggttaccaggagaatttcaaacgatccggggcggaaaaattggtca
tggaattccaaggatgatgtatttcttaacggggcatattttgtttcatccgggaatgtt
tggacgcctaattattctgcatcccaagcatttgaattggctccaggaggaagtgtacct
attttgactcttcatgctggtcctctccaattataa
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