Coffea arabica (coffee): 113709412
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Entry
113709412 CDS
T11342
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00500
Starch and sucrose metabolism
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
113709412
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
carb01003
]
113709412
Enzymes [BR:
carb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
113709412
Glycosyltransferases [BR:
carb01003
]
Polysaccharide
Storage polysaccharide
113709412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Peptidase_M2
Motif
Other DBs
NCBI-GeneID:
113709412
NCBI-ProteinID:
XP_027087975
UniProt:
A0A6P6UB32
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Position
9e:38896107..38910212
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AA seq
1193 aa
AA seq
DB search
MEVPLPLQKPLSCRAVVNGRTHIKITPFLGFLPHRTTSLLSSQSSLWSKDYGVAHISHRI
TASADFSRRRQRRTPTPRTQDSTPKGFVPKTQPGTSSQRRDQKNNGQKESQSNLPPKDLG
TANKNRIELKQTSEEQDDDIEQAKEEDYENEIDNVVEEDWPSRKPPLDAEMSKLTENGRI
RSGNKDLTETNEVRGVAKENEVDGHLSGIALEDQPFDVIASNKPVEIDDPKQQDTIKKND
VNQIGSTQIVKYMSEDEFLKPEQKEKDDSSLRLRMEMEANLRKHALERLAEENFEKGNRL
FCYPELVKPDQDIEVFLNRSLSTLSNEPDVLIMGAFNDWRWKSFTTKLDKTSLNGDWWAC
QVHVPKEAYKIDFVFYNGKDVYDNNDKKDFCITVEGGMTVPEFEDFLLEEKRKELEKLAK
EEAERKRHEEEQKRIEAEKAAREADRAQAREEAARRQEMLKEWIKKAAKSVDDVWHIEPS
DFKGGDKVRLFYKKSSGPLIQAEELWLHGGHNKWKDGLSISTKLARSERKSGDWWYAEIV
VPNRALVLDWVFADGPPHQARVYDNNDRQDFRAIVPRRVPEDHYWVEEEHQIYQNLQEER
RIREEAIRAKAEKTAWMKAETKERTLKTFLLSQKHIVYTEPLDVQAGNAATVFYNPTNTV
LNGKPEIWFRFSFNRWTHRMGPLPPQRMLPADQSSHVKATVKVPLDAYMMDFVFSEKEDG
GIFDNKNGMDYHIPVIGGVIKEPPMHIVHISVEMAPIAKVGGLGDVVTSLSRAVQDLKHS
VDVILPKYDCLNFSHVKDFQFHKSYSWGGTEIKVWFGKVEGLSVYFLEPQNGFFGKGCIY
GCHNDGERFGFFCHVALEFLLQSGFHPDIIHCHDWSSAPVAWLFKEQYMHYGLSKARIVF
TIHNLEFGAHLIGKAMAYTDKATTVSPTYSREVSGNPAVASHLYKFHGILNGIDPDIWDP
YNDKFIPVSYTSENVIEGKRAAKEVLQQKLGLKRADLPLVGIISRLTHQKGIHLIKHAIW
RTLDRGGQVVLLGSAPDPRIQNDFVNLANQLHSSHNDRARLCLTYDEPLSHLIYAGADFI
LVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQACALEPNGFSFDGA
DAAGIDYALNRALSAWNDGRDWFNSLCKRVMEQDWSWNRPALDYLELYHAALK
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaggtccctttgccactgcagaaaccattgagttgtagagcagtggttaatggtaga
acccacatcaagatcacgccttttttgggattcctgcctcatagaaccacaagcttgttg
tcttcccaatcttctttatggagcaaggactatggggtagctcacatttcgcatcgaatc
actgcaagtgcagatttttctagaagaagacaaagaagaacaccaactcctagaactcaa
gactctacaccaaaagggtttgtgccaaaaacacagccagggacaagcagccagagaaga
gatcagaaaaacaatgggcagaaagaaagtcagagtaacttgccacccaaggatcttggg
actgcaaacaaaaatagaattgaactcaaacaaaccagtgaagaacaggatgatgacatt
gaacaagcaaaggaggaagattatgaaaatgaaattgacaatgttgttgaagaggactgg
ccaagccggaaaccaccacttgatgctgaaatgagcaagttgacagaaaatggaagaatt
agatctggtaataaggacctcactgagacaaatgaagtaagaggagttgcaaaggaaaat
gaagttgacggtcatttgagtggaattgctttagaagatcagccatttgatgttatcgca
agtaataagcccgtcgaaattgatgacccaaaacagcaagacacaattaagaaaaatgat
gtaaaccagatcgggagtactcaaattgtcaaatatatgagtgaagatgaattcttgaaa
ccagagcaaaaggagaaggatgattcttctctaaggttaaggatggaaatggaagcaaat
ttacgcaaacatgcattggaaaggcttgctgaagaaaattttgagaaaggaaacagatta
ttctgttatcctgaattggtaaaacctgatcaagatatagaagtgttcctcaatagaagt
ctatccacattgagtaatgaacctgacgtactgataatgggagcctttaatgactggcga
tggaagtcttttactacgaagttggataagacaagtctcaatggtgattggtgggcttgc
caggtccatgttcctaaggaagcatacaagatagattttgtgttctacaatggaaaagat
gtctatgataataatgacaaaaaagatttctgcattactgttgaaggtggtatgactgtt
cctgagtttgaagatttcttgcttgaggagaaacgcaaggagttggagaaacttgcgaag
gaggaagctgaaaggaaaagacatgaagaagaacagaagcgcatagaagcagagaaagct
gcacgtgaggctgatagagcacaggcaagagaggaggctgcaaggagacaggaaatgttg
aaagagtggataaaaaaggctgcgaagtctgttgatgatgtctggcacatagaacctagc
gattttaaaggtggggacaaggtcaggttgttctataaaaagagctcaggtccattgatt
caggctgaggagttatggctgcatggaggtcacaataagtggaaggatgggctgtccatc
tcaacaaagcttgccagatctgagaggaaaagtggagattggtggtatgctgaaattgtt
gtgcctaatcgtgcccttgtcttggactgggtttttgctgatggtccacctcaccaagca
agggtttacgataacaatgataggcaggatttccgtgctattgttccacggcgtgttcct
gaggatcactattgggttgaagaagagcatcagatataccaaaatctccaagaggagaga
cggatcagagaggaggccatccgtgctaaggctgagaagacagcatggatgaaagcagaa
acaaaggaaagaactttgaaaacatttcttttatctcaaaagcatattgtctacactgaa
cctcttgatgtccaagctgggaatgctgcaactgttttctataatcctaccaacacagtc
ttgaatgggaagcctgaaatttggttcagattctcattcaatcgttggactcaccgtatg
ggtccattgccaccacagagaatgttgcctgctgatcaaagttctcatgttaaagcaact
gttaaggttcctttagatgcatatatgatggactttgtattctctgagaaagaggatggt
ggaatttttgacaacaagaatggcatggactatcacatacctgttattggaggagttatc
aaggaacccccgatgcatattgtgcatatttcagttgaaatggctcccattgcaaaggtg
ggaggccttggtgatgttgtcactagcctttcccgtgctgtacaggatttaaaacatagt
gtagatgttatccttccgaagtatgactgtttgaactttagccatgtcaaggattttcag
tttcataaaagctattcttggggtgggactgaaattaaagtttggtttggcaaggtggaa
ggcctctctgtctactttttggagcctcaaaatgggttttttgggaaaggctgtatatat
ggttgccataacgatggtgaaagatttggtttcttttgtcatgttgctcttgagttcctt
ttgcaaagtggattccatccagacattattcattgtcatgattggtctagtgctccagtt
gcatggttattcaaagaacaatatatgcactatggtcttagtaaagcccgcattgttttc
acaatacataacctcgaatttggagcacatttgattggcaaagcaatggcatacactgat
aaggctacaactgtctcccccacttattcacgggaggtctcaggaaatccagcagttgct
tctcatctttacaagtttcatggaatactaaatggcattgacccagacatatgggaccct
tataatgataaattcattcctgtatcttacacttcagaaaatgttattgaaggcaaaagg
gctgctaaagaagttttgcagcagaagcttggcttgaaaagggcagacctgcctctggta
ggaattatcagtcgtttgactcaccagaaagggatccacctaataaaacatgcaatttgg
cgcactttggaccgcggtggacaggttgtcctgctgggttcggctcctgatccacgcatc
caaaatgattttgttaatttggcaaatcaattgcattcttctcataatgaccgtgcacgc
ctttgcctgacctacgatgaacctctgtctcacttgatttatgctggtgcagattttatt
ttggtcccttcaatttttgagccatgtggactcactcaacttacagcaatgagatatggt
tcgatccctgttgttcgtaaaactggagggctttacgacactgtatttgatgttgaccat
gacaaagaaagagcacaagcttgtgctttggaaccaaatggattcagttttgatggagca
gatgctgctggcattgattacgcactcaatagagctttgtctgcttggaatgatggccga
gactggttcaattcgttgtgcaaacgagtaatggagcaagactggtcttggaatcgccct
gctcttgattacttggagctctatcatgcagctctaaagtaa
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