Coffea arabica (coffee): 113709817
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Entry
113709817 CDS
T11342
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113709817
03036 Chromosome and associated proteins [BR:
carb03036
]
113709817
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113709817
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113709817
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
113709817
microRNA pathway
RISC loading complex
113709817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
113709817
NCBI-ProteinID:
XP_071921954
UniProt:
A0ABM4VR00
LinkDB
All DBs
Position
9e:complement(33804068..33808884)
Genome browser
AA seq
1075 aa
AA seq
DB search
MEGKNYGRGGTGGGSSGRGRGGGGAGRGRGRGRSSGGDDQSYGGRRGRGRGTHMGGGYDS
RFPGGGESDRSYRGQYDQRQGDSGGRGAWGRGAHEGGYAPAVSGGGSEMDQRYRGQYPQL
EGGRGARGPGTQVAGGVGGGEFIQKLQQPSGGGVGPSGRGAWTGRPWGPSASSSSAPAQY
QPRPQHPQPTPALSDVQSLRISEEKPLSAEGKPDNKLLPIKRPDRGILAVRTVKLLANHF
PVKFNSEGIITHYDVDIQQVMPGGNQPHRRSIPKALLSLIKDKLFSDEGFPVDMVTYDGE
KNIFSAVSLPTGEFKVELSDGEENVRTYKFVIQKVNQLKLSNLKDYLCGNLPHIPRDILQ
AMDLVMKHNPSMHRIPVGRSFFSKNERGDDLGHGIAAYRGFYQSLKPTSNGLALCLDYSV
LAFRKPLPVIDFLKENVEGFRGVNDVMRMRRQVESALKGLKVRVTHRKTKQKYTISGLTR
DITRLIKFSLVDPDGQVPPREVSLVDYFRQKYEEKIAHLDIPCLDLGRKDKKNDVPMEFC
VLVEGQRYSKEYLERNEKDAAVLLKQISLAPPAVRKRTICDMVQAEDGPDGIVAKGFNMQ
LEKCMTSVGGRVLGAPELKLGGKNGNVYPVRVDQEKCQWNLVDKCVVQGKPVERWALIDF
TSSSRYRLRKEDFIGNLIQRARRLGMHMQEPLVCHSTGMDEFYSVDRIDALLRKVIADAR
PRSGSQGTLQIIVCVMAGKDPGYKYLKWVSETRIGVVTQCCLCSQANRGQDQYLANLCLK
INAKLGGSNVELNDRLPNFADQDYVMFIGADVNHPAARNSTCPSIAAVVGTINWPAANRY
AARVQPQEHRKEKIVNFGSICRDLVSTYAKLNKIRPKRIVVFRDGVSEGQFDMVLNEELL
DLKRAICDENYQPTITLVVAQKRHHTRLFLEGGRDNRVGNVPPGTVVDTTIVHPFEFDFY
LCSHYGTLGTSKPTHYYVLWDENAFTSDRLHQLIYNMCFTYARCTKPVSLVPPVYYADLV
AYRGRMFQEVVMEQPPASSPSSSSATPSVSLSSSASFDHNFYTLHPDLQNVMFFV
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaaaaactacggccgcggaggaactggtggtggctcctctggtcgtggtcgg
ggtggtggtggtgctggtcgtggtcgtggtcgtggtcgtagcagtggaggtgacgaccag
agttatggaggtagacggggaaggggtcgtgggacccacatgggtggtggttacgatagc
aggtttccaggcggtggcgagtcggatcggagttataggggtcagtacgaccagcgtcaa
ggggacagcggtggtcgtggagcttggggtcgtggggcccacgagggtggctatgctccg
gctgtcagtggtggtgggagtgaaatggatcagcgttaccggggtcagtacccccagctg
gagggtggtagaggagctaggggtcctgggacccaagtggctggcggcgtcggcggcggt
gagttcatccagaaactgcagcagccaagtggcggtggtgtgggacccagtggcagaggg
gcttggactggtaggccgtggggtccatctgcttcttcatcaagtgctccggctcagtat
cagccccggcctcagcatcctcaacctactcctgctctgtcggacgttcagtcactaagg
atttcagaggagaagccactatcagctgaggggaaaccagataacaaacttctgcctatc
aaaaggcctgacaggggaattcttgctgtcaggactgtcaagcttcttgctaatcatttt
ccagtgaaattcaactctgagggaattattacccattatgatgtcgatattcaacaagtt
atgcccggtggaaatcagcctcacaggagatcaattcccaaggctcttttgtccttgatt
aaagacaagctgttttctgacgaggggttcccggtagatatggttacctatgatggggag
aagaatattttcagtgctgtttcactccccactggggaattcaaagttgaattatctgat
ggggaagagaatgttcgcacttataaattcgtcatccaaaaagtgaatcagcttaagctc
tctaacttgaaagactacctgtgtggaaacctcccacatattcctcgtgatatactgcag
gccatggacttggtcatgaagcataacccgtctatgcataggatccccgtagggcgaagc
tttttctccaagaacgaacgcggggatgatcttggtcatgggattgccgcatatagaggc
ttctaccagagcttgaagcctacctcgaacggtctagcgctgtgtttggactactcagtt
ttggcattccgaaagcctctgccagttatcgacttcctgaaagagaatgttgaaggattt
cgaggagtgaatgatgttatgaggatgagacgacaggttgaaagtgctttgaaagggttg
aaagtaagagtaacacatcgtaaaaccaaacaaaagtataccatatcagggctcacccga
gacattacacgtttgattaaattttcacttgtagatccagatggccaggtgccaccaaga
gaagtcagccttgttgactacttcaggcagaaatatgaggagaaaattgcccatctcgat
attccttgcttagaccttgggagaaaagacaagaaaaatgatgtaccaatggaattttgt
gtcttggtcgaaggtcagaggtattccaaggaatacttggaaagaaatgagaaagatgca
gccgtgttattaaagcaaatatcgttggctccaccggcagtaagaaaacgtacaatctgt
gacatggtgcaggctgaggatggacctgatggaattgttgctaaaggcttcaatatgcaa
cttgaaaaatgtatgacatctgttggaggtcgagtcctcggtgcacctgagttgaagcta
ggtggtaaaaatggcaatgtatatcctgtaagagttgaccaggagaaatgccagtggaac
cttgttgacaaatgtgtagtacaaggaaaaccagttgagcggtgggctttgatagatttt
acttcatcaagccgttacagactgcgaaaagaagacttcatcgggaacctaatacagcgt
gcacggagactgggaatgcatatgcaggagcctcttgtttgtcactcgactggaatggat
gaattctattccgttgatagaattgatgcccttcttagaaaggttattgctgatgctaga
cctagaagtggttcacagggtacgctgcaaatcattgtctgtgtaatggctggaaaggat
cctggatataagtatcttaaatgggtctctgagacacgaattggtgtggtgactcagtgt
tgtttgtgctctcaagcaaacaggggacaagaccagtatttggcaaatctttgtctcaag
attaatgcaaagcttggaggcagcaatgtggagctcaatgataggcttcctaattttgct
gatcaagattatgttatgttcattggggctgatgtgaatcatccggctgcacgaaactct
acatgtccatcaatagcagcagttgtgggcacaattaactggcctgctgccaatcgatat
gctgcaagggttcagccccaagagcaccgcaaggaaaagatcgttaattttggaagtatt
tgtcgtgatctagttagtacttatgccaagctcaacaagatcagaccaaaaagaattgtc
gtattccgagatggtgttagtgaggggcagtttgatatggtgctaaatgaggagttactt
gatctaaaacgggccatctgtgatgagaattatcaaccaacaatcacccttgttgtggca
caaaagagacaccacactcgacttttccttgaaggtgggagggataatagagtgggaaat
gttcctccaggaaccgttgtggacacaacaattgttcatccctttgagttcgacttctac
ctttgtagccattacggaacccttgggacgagcaagcctacgcactattatgttctttgg
gatgaaaatgcgttcacatccgacaggttgcatcagctcatatacaatatgtgcttcact
tatgctcgatgcactaagcccgtttcactagttccgccagtctattatgctgaccttgtc
gcctaccgcggacgaatgttccaagaggtagtaatggagcaacctccagcatcgtctcca
tcatcatcttctgcaacaccatctgtatcattgtcatcttctgcttcgtttgatcacaat
ttctatactctgcatccagacctccaaaatgtcatgtttttcgtctag
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