Coffea arabica (coffee): 113710223
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Entry
113710223 CDS
T11342
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00500
Starch and sucrose metabolism
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
113710223
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
carb01003
]
113710223
Enzymes [BR:
carb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
113710223
Glycosyltransferases [BR:
carb01003
]
Polysaccharide
Storage polysaccharide
113710223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
CCDC24
Flg_hook
Motif
Other DBs
NCBI-GeneID:
113710223
NCBI-ProteinID:
XP_027088909
UniProt:
A0A6P6UEB9
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Position
9e:3332504..3349986
Genome browser
AA seq
1145 aa
AA seq
DB search
MEAKLASSFLGQRWWCYGGGGLDYCKQGNVRFCPSVSHRFLPASCKMRQRNHSSQNKRQQ
AKKLYPDRPTGVNFPATSDEDSDMENFSNDGITSLKDTADDLDAAVKAEQTDHPTSDDLL
ATSGEDSDTEKFSKNGITILKDTADDLDAEQTEILPNNKITRLKDTADDLDAAVKAEQTD
HPTSDDLLATSGEDSDTEKFSKNGITILKDTADDLDAEQTEILPNNNITRLKGDANGMDF
ASEAELSNENMSLTLLNEIRPVSIAANGEDEANGEDELSNVHLSGLIGMIRNAEKNIHLL
NHARITALEDLEKILSEKEALQGKMNVLEMKLAETDEKLRVAAQQKMHVELLEDQLEQLR
NELLARGDNEGSMHDKHVSLPFSLSEELDVLRTENLSLKNDLQALKADLGDIKGTDERVQ
MLEREKSFLESSLKGLDNKLAASQVEVSKLSMLKFECKNLYEKVEHLQTLLDKAAKQADQ
AIFVLQENQELRKKVDKLEESLEEANVYKLSSERLQHYNDLMQQKLRILDERLQKSDEEI
HGYVQLYQDSVKEFQDTLSNLKEESKRRAEDEPVNDMPWEFWSQLLLMIDAWLLEKKIST
DDAGLLREMVWKRDGHICNAYMSCKEKKQHEIISMFLRLISSPKSSELHVIHIAAEIAPV
AKVGGLGDVVTGLGKALQRRGHLVEIILPKYDCMQYELIHDLRALDAVVESYFDGQLHKN
KIWTGTVEGLPVYFIEPHHPGNFFWRGQFYGEHDDFKRFSFFSRAALELLIQAGKKPDII
HCHDWQTAFVAPLYWDIYAPKGLNSARLCFTCHNFEYQGTAPASELASCGLDVHHLNRPD
RIQDNSAHDRVNPIKGGIVFSNIVTTVSPTYAQEVRTAEGGRGLHATLNSHAKKFVGILN
GIDTDAWNPTRDTFLKVQYSAFDTQGKAENKEALRRKLGLSSANIGQPLVGCITRLVPQK
GVHLIRHALYRTLELGGQFILLGSSPVSHIQREFEDIANQFQSHENARLLLKYDESLARF
IYAASDMVVIPSIFEPCGLTQMIAMRYGSIPIVRKTGGLNDSVFDVDDDTIPEEFRNGFT
FLTADEQAFNNALERAFFHYKNNSEFWQKLVQKVMRIDFSWDSSASLYEELYEKSVARAR
AANRA
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaagttggcatcaagctttctagggcaaagatggtggtgctatggaggagga
gggctcgactactgtaagcaagggaatgtacggttctgcccttcagtttctcatcgtttc
ctcccagcttcttgcaaaatgcgccagcggaatcacagttcccaaaataaaagacagcaa
gcgaagaagttatatcctgatcgtcccacaggtgtgaatttccctgcaaccagtgacgaa
gattctgatatggaaaacttctccaatgatggcatcacaagcttaaaagatacagcagat
gaccttgatgctgctgtaaaagctgagcaaactgatcatcccaccagtgatgatttgctg
gcaaccagtggtgaagattctgacacagagaagttctccaaaaatggcatcacaatcttg
aaagatacagcagatgaccttgatgctgagcaaactgaaatacttcccaataacaaaatc
acacgtttgaaagatacagcagatgaccttgatgctgctgtaaaagctgagcaaactgat
catcccaccagtgatgatttgctggcaaccagtggtgaagattctgacacagagaagttc
tccaaaaatggcatcacaatcttgaaagatacagcagatgaccttgatgctgagcaaact
gaaatacttcccaacaacaacatcacacgtttgaaaggtgatgccaatggtatggatttt
gcatcagaagctgagctgtcaaatgagaatatgagcttgactctgctcaatgagattaga
cctgtgtcaattgctgctaatggtgaggatgaggctaatggtgaggatgagctttcaaat
gttcatctttcaggtttaattgggatgattagaaatgctgaaaaaaatatccatctactc
aaccatgctcggattaccgctcttgaagatcttgaaaaaattcttagtgagaaagaggct
ttacaggggaagatgaatgttttggagatgaaacttgcagaaactgatgagaagctcaga
gttgctgcacaacaaaagatgcatgtggaactccttgaagatcagttggaacaattacga
aatgagttgcttgctaggggtgataatgaaggcagtatgcatgacaagcatgtctccctg
cctttttctcttagtgaggagcttgatgtactgagaactgagaacttgtccctaaagaat
gatcttcaagcactaaaagcagatcttggagatattaagggaacagatgaacgtgttcag
atgttagagagagaaaaatcgtttttggagtcttcattgaaagggttggataataaactt
gctgcatctcaggtagaagtttcaaaattatctatgttgaagtttgaatgcaaaaatttg
tatgaaaaggtagagcacttgcaaacattacttgataaggcagccaaacaggcagaccaa
gctatttttgtcctgcaagaaaaccaagaactacgaaagaaggttgacaagcttgaagaa
tctcttgaagaggctaatgtctacaagctatcatcagagagattacaacattataatgat
ctaatgcagcaaaaactaagaattcttgatgaacggcttcaaaagtctgacgaagagatt
catggttatgttcagttgtatcaagattctgtaaaagaatttcaggatacactcagtaat
ctaaaagaagaaagcaaaagaagagcagaggatgaacctgtgaatgatatgccttgggaa
ttctggagtcagttattgcttatgattgatgcttggttgcttgaaaagaagatatcaacc
gacgatgccgggctcttgagagaaatggtatggaagagagatggacatatttgcaatgca
tacatgtcatgcaaggaaaagaaacaacatgaaataatctctatgtttctacggctaatt
tcatcccctaaaagttcagagttgcatgtcattcacattgctgctgagatagcacctgtt
gcaaaggttggtggtcttggtgatgtggtgactgggctcggtaaagctttacaaaggaga
gggcatcttgtggagattattcttcctaaatatgattgcatgcagtatgagcttattcat
gatttaagagctttagatgcagtggttgagtcatactttgatggtcagctacacaaaaac
aagatctggactggcaccgttgaaggtcttcctgtctattttattgagcctcatcatcca
ggaaatttcttctggagaggacaattttatggtgaacatgatgattttaagcggttctca
ttcttcagtagggcagcacttgagttacttattcaagctggcaagaaaccagatataatc
cattgccatgattggcagacagcttttgtggctccgctatattgggatatttatgcacca
aaaggtttgaattcagctcggctatgttttacatgccacaattttgagtatcaagggact
gcgccagcttcagaactagcatcatgtggtcttgatgttcaccatttaaatagaccagat
agaatacaagacaattccgcacatgacagggtcaatcccattaagggaggaattgtgttc
tctaacattgtaacaactgtttcaccgacctatgcccaagaggtgcggactgctgaggga
ggacgaggccttcatgctacactgaactctcatgctaaaaaatttgtgggaattctcaat
ggaatagatactgatgcatggaaccccactcgtgacacttttctcaaagtacagtacagt
gcctttgatactcaagggaaagctgaaaataaagaagctttaagaagaaagctaggtctt
tcttctgctaatattggacagcctttggttggatgcatcacaaggttggttcctcaaaaa
ggtgtgcatcttattaggcatgcactgtatcgaacgctggaactaggaggccaatttatc
cttcttggatcaagccctgtgtcacatattcagagggaatttgaagacatagccaaccag
tttcagagtcatgaaaatgcaagattgttattgaagtatgatgagtctctagctcgtttt
atatatgctgcgtctgacatggttgtcatcccctccatctttgaaccttgtggccttaca
cagatgattgcaatgagatatggatccatcccaattgtgaggaaaactggaggtctaaat
gacagtgtttttgatgttgatgatgacacaatacctgaagagttcagaaatggattcaca
tttttgacggctgatgagcaggcgtttaacaatgccttggaacgtgcctttttccactat
aagaacaatagtgaattttggcaaaaacttgttcaaaaggttatgaggattgactttagc
tgggactcgtcagcttctctatatgaggagctttatgaaaagtctgtggcaagagctagg
gctgcaaatcgtgcctga
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