KEGG   Coffea arabica (coffee): 113710234
Entry
113710234         CDS       T11342                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113710234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113710234
Spliceosome [BR:carb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113710234
 Complex B
    113710234
 Complex C
   U2 SnRNP specific factors
    113710234
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 113710234
NCBI-ProteinID: XP_027088930
UniProt: A0A6P6UDN5
LinkDB
Position
9e:35838534..35843928
AA seq 812 aa
MLGNLPILPLPAPPSDGNLGPLPLAQITEEDEKQNGSQEDLSKADKSNSAPISVATHTRT
IGIIYPPPDIRNIVDKTSQFVAKNGPEFEKRIIASNAGNPKFNFLNASDPYHAYYQHRLS
EARAQNQVSALQPLQLADSAAPESAAAAPAADGKDAIAKPDPSVQFRPVRKILEPPEAEQ
YTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFLFLKPTHSMFMFFTS
LADAYSKVLMPPKALTDKLRRSVTDMTTVLERCLHRLEWEQSQEQARQKAEDEIEQERLH
MAMIDWHDFVVVETIDFADDEDEDLPPPMTLEEVIRRSKMTGVEEEEIIEPGKEVEMEMD
EEEVQLVEEGMRAASLEENGDLKNNEAKVTIDEAEPPMRIVKNWKRPEERLPAERDPTKF
VVSPITGELIPDNEMSEHIRISLIDPKYKEQKERMFAKIRDTTLAPDDEITKNIVGLART
RPDIFGTTEEEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTASQAMSQNAGGEDLNEA
GNSDMRNLPGPAAPPPPRPGMPSIRPLPPPPGLALNIPRPPNTVQYSTPTGPGVLAPPPP
RPPVVGVLPRPAPHPMSMMPGQQPLMVNRPQMHPSMSMNSPNMPVPPPPGSQFTHLSAPR
PFVPLSMSQPGLPMVPPPSMPQGMPPPPPEEAPPPLPEEPEPKRQKLDDALLVPEDQFLA
QHSGPARINVSVPNHDEGNMKGQVLEILVQSLSETVSSLKEKIAGEIQLPANKQKLSGRP
GFLKDNLSLAYYNVAPGETLQLSLRERGGRKR
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgttgggcaatttgccgatattgcctttacctgcacccccttctgatggtaatcttggg
cctttaccactagctcagataactgaagaagacgagaaacagaatggaagtcaagaggat
ctgagcaaagctgacaaatccaactcagctcctatttcggttgcgactcatacgagaact
attggtattatttatcctcctccagatatcagaaatattgttgacaagacatctcagttt
gtggccaagaatggtcctgagtttgaaaagaggattatcgctagcaatgctgggaatcca
aaatttaactttttgaatgcctctgatccataccatgcatactatcagcatcgtttatct
gaagctcgtgcacaaaatcaggtttctgctctgcagccattgcaactggcagattcagct
gctcctgagtctgcagctgctgccccggctgctgatggcaaggatgcgattgcaaagcct
gatccgtcagtgcagtttaggcctgttcgtaaaattcttgaaccccctgaagcagagcag
tacactgttcgtctccctgaagggattacaggggaggagttggacataattaagcttact
gcccagtttgtcgcaaggaatgggaaatcatttttgactggattgaccagtagggagatt
aacaatcctcaatttctttttctaaaaccaacccatagcatgtttatgttttttacatct
cttgcggatgcttattcgaaagtattgatgcctccaaaagcgttaacggataagttgagg
aggagtgtaactgacatgactacggtgcttgaaagatgccttcatcgcttggagtgggaa
cagtcgcaggagcaggctaggcagaaagctgaagatgagatagaacaggagcgattacat
atggccatgattgattggcatgactttgttgtagtagagaccatagactttgcagatgat
gaggatgaagatttgccccctcctatgaccctggaggaggttatacgaagaagcaagatg
acaggagtggaagaagaggagatcattgagcctgggaaggaagtagaaatggaaatggat
gaagaggaggtgcagcttgttgaggagggcatgagggcagctagtcttgaagagaacggg
gacctgaagaataatgaagctaaggttacaatagatgaagcagaaccacctatgaggata
gtaaagaattggaagagacctgaggagaggttacctgctgaaagagatccaactaaattt
gttgtgtctccaataactggtgagctgattcctgacaatgagatgtctgaacatatcagg
atctctttaattgatccaaagtacaaggagcagaaggagaggatgtttgcaaaaattagg
gatacaactcttgctcctgatgatgagatcacaaaaaatattgttggacttgctcgaacc
cgtcctgatatttttggtactactgaggaggaagtctctaatgctgttaaggcagagatc
gagaagaaaaaagatgatcaaccaaagcaagtcatttgggatgggcatacaggaagtatt
ggtcgtacggcaagtcaggccatgtctcagaatgctggtggagaagatctaaatgaagca
ggcaacagtgacatgagaaatcttccaggtcctgcagctcctcctcctcccagacctggc
atgccatcaattagacctcttcctccacctcctggacttgccttgaatatccctaggcct
cctaatactgttcagtattcaaccccaactggtcccggtgttttggctccacctcctcct
aggcctccagtcgtcggtgttctgcctagacctgcacctcatccgatgtcaatgatgccg
ggccagcaacctctgatggtaaatcgaccccaaatgcatccgtccatgtccatgaattcc
cccaacatgcctgtgccaccgccacctgggtctcaatttacacatttgtctgctccccgg
ccttttgttcccctttccatgtctcagcctggcctgcctatggtcccaccaccatccatg
cctcagggaatgccaccacctccacctgaggaagctcctccaccacttcctgaagaacca
gaaccaaaaagacagaaacttgatgatgctctgcttgttcccgaggatcaatttttagct
caacattcgggacctgctcgtatcaacgtgtctgtgcccaatcatgatgaaggcaatatg
aaagggcaggtgctggagattcttgtgcagtcgctgtctgaaactgtcagcagcttgaaa
gagaaaatagctggtgagattcaacttccggctaacaaacagaaactgagtggaaggcct
ggttttctcaaggacaatttgtcgctcgcatattataacgttgcacccggagaaacactt
caactctctctcagagagcgtggaggaagaaagagatga

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