Coffea arabica (coffee): 113710374
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Entry
113710374 CDS
T11342
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
carb Coffea arabica (coffee)
Pathway
carb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113710374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113710374
03036 Chromosome and associated proteins [BR:
carb03036
]
113710374
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113710374
Coactivators
SAGA/TFTC/STAGA complex
113710374
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113710374
STAGA complex
113710374
TFTC complex
113710374
SAGA complex
113710374
SLIK complex
113710374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113710374
NCBI-ProteinID:
XP_027089137
UniProt:
A0A6P6UH21
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Position
9e:27089554..27101409
Genome browser
AA seq
674 aa
AA seq
DB search
MDEEEIEKAVMTYLKKKGFKQTELAFQEEQQRQHPKTALHSTNSHVDPEIACQILSFSSE
LESNPAQYHEGYGKLRSWAYSSLDLYKHELLRVLYPVFVHCFMDLIAKGHIQEARTLFNS
FREDHEMMHARDLQKLEGVLSPSHLEEMEFAHSLRQSKFNIKICQYSYDLLLQYLHKTQS
VVMLGLINEHINFQVSPGQPTSISDDAEVVTLMGSGQDAVNLINQKEIHWGLLEDSLEER
LEKAGALVPDSAKVDGEAREGEVEENKKRPYEGGKQGASLKKSKKDKVATATGKASRVET
STVSVAPRVKPELTLPSIPAEVEHSILEDLRNRVQLSSAALPSISFYTFINTHNGLNCAS
ISQDGSLVAGGFSDSSLKVWDMAKLGQQTGYATSQIVEDSYPSDSLLGANSGRKSYTLFQ
GHSGPVYSATFSPFGDYILSSSSDSTIRLWSTNLNTNLVCYKGHNYPVWDVQFSPVGHYF
ASSSHDRTARIWSMDRMQPLRIMAGHLSDVDCLQWHANCNYIATGSSDKTVRLWDVQSGE
CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTVMMWELASGRCISPLVGHTSCVWTLAFS
CEGSLLASGSADCTVKLWDVTASTKLLKTEDNKTGSINRLRSLKTLPTKSTPVYSLQFSR
RNLLFAAGVLSKNT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagaaattgagaaagctgtaatgacctacttgaaaaagaagggtttcaag
caaacggagttggccttccaagaagaacaacagcgacagcatcccaaaaccgccttgcac
tccaccaattcccatgttgaccctgaaatcgcttgtcaaatcctctcattctcttctgaa
ttggaaagtaatcctgcccagtaccatgagggatatggcaagcttcgatcatgggcctac
agttcattggatttatacaagcacgagttgcttcgagttctgtatcctgtttttgttcat
tgcttcatggatcttattgcaaaaggtcacattcaagaagcaagaactttgtttaatagc
tttcgtgaagaccatgagatgatgcatgcacgtgatctccaaaaactggaaggtgttctg
tcgccctctcacctggaggaaatggaatttgcccattctctaagacaaagcaaattcaac
attaaaatttgtcagtactcgtatgatctactgctgcaataccttcacaagacgcagtct
gttgtaatgcttggactaataaatgagcacatcaactttcaagtctctcctggacaacca
acttcaatttctgatgatgctgaagttgttacactcatgggcagtggccaggatgccgtg
aatctgataaatcagaaagaaatacattgggggttgcttgaagatagtttggaagaaagg
ttggagaaggcaggagctctggttccagattcagcaaaggtggatggagaagcaagggaa
ggagaggtggaagagaacaagaaaagaccatatgagggaggaaagcaaggtgcttcgctc
aagaagtcaaaaaaggataaggttgctactgcaacaggcaaagcttctcgtgtggagact
agcacagtatctgtggcaccacgtgtcaaaccagagctaaccttgccatcgataccggct
gaggtagagcattctattcttgaagatctccggaatcgggtacaactgagtagtgcagct
cttccttctatcagcttttacacatttattaacacacataatgggttaaattgtgcgtca
atatcccaagatggatcactcgttgctggtggcttctcagactcatcgcttaaggtttgg
gacatggccaagcttgggcaacaaactggttatgctacttcgcagatagtagaggattca
tatccgagtgactctttacttggtgcaaacagtgggagaaaatcatatacattatttcaa
ggccattctggacctgtatattctgctacttttagtccatttggagattatattttgtct
tcttcatcagattcaacaattcgtttatggagtacaaatttgaatacaaatcttgtttgt
tacaaaggtcataactaccccgtatgggatgttcagttcagtccagtgggacattatttt
gccagctcttcacatgatagaacagcaagaatctggtctatggacagaatgcagcctttg
agaatcatggctggtcacttatctgatgtagattgtctgcaatggcatgctaactgcaac
tatatcgcaactggatctagtgataaaactgttcgcttgtgggatgttcaaagtggggag
tgtgtaagaatatttattggtcaccggagtatgatcttatcattggctatgtccccagat
ggacgatacatggcatctggtgatgaggatggtacagttatgatgtgggaacttgccagt
ggtcgttgcattagccccttggttggtcatacatcttgtgtatggacacttgcttttagt
tgtgaaggttcacttcttgcatctggttctgctgattgcactgtgaaattgtgggatgta
actgcaagcacaaaactgttaaagacagaggacaataaaactggaagtataaatagactc
cggtcactgaagactctaccaacaaagtctaccccagtttattctttgcagttctcacgg
aggaatcttctatttgctgctggagtactctcaaaaaatacttaa
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