Coffea arabica (coffee): 113710392
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Entry
113710392 CDS
T11342
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00900
Terpenoid backbone biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113710392
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
carb01006
]
113710392
Enzymes [BR:
carb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113710392
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
113710392
2.5.1.29 geranylgeranyl diphosphate synthase
113710392
Prenyltransferases [BR:
carb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113710392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
113710392
NCBI-ProteinID:
XP_027089164
UniProt:
A0A6P6UF41
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Position
9e:complement(40817044..40819596)
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AA seq
346 aa
AA seq
DB search
MLSAGIYSSSHMLMYQNHQLLPKPKAGRPIFSRTISAIRCSAFASSSSTVATQFDLKTYW
TGLIEEINQKLDEAIPVKYPHQIYEAMRYSVLAMGAKRAPPVMCVATCELFGGNRLAAFP
TACALEMVHAASLIHDDLPCMDDDPSRRGQPSSHTVFGVDMAILAGDALFPLGFRHIVSH
TPTDLVPETRLLQVIAEIARSVGSTGMAAGQFLDLEGGPNAVDFVQEKKYGEMAESSAVC
GGLLGGASDEELQLLRKFGRAVGVLYQVRSDVLKAKIETRDKDEDKRSKSYVGVYGVEKA
MEVAEDLKAEAKKALEGLEKYGERLLPLYSFVDYADDRGFSLDAGI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgctggaatctattcttcttcgcatatgttgatgtaccagaaccaccagctc
ctcccaaaaccaaaagccggtcgtcccattttctcaagaaccatatcagcaattcggtgc
tctgccttcgcctcatcatcatcaacggtggcgacccaattcgaccttaaaacttattgg
accggtctcatcgaagaaatcaaccagaagctggatgaggccattccggtcaaatacccc
catcagatttatgaggccatgcgttactccgttcttgccatgggtgccaagagggcccca
cctgtcatgtgcgtcgccacctgcgagctcttcggcggtaaccgtctcgccgccttcccc
accgcctgtgctcttgaaatggtccatgctgcttccttgattcatgatgatttgccctgc
atggatgatgatccatcccggcgaggtcagccctcaagccacactgtattcggtgttgac
atggcaattttagctggtgatgctttattccctcttggcttccgccacatagtctcccat
acgccgactgatctcgttcctgagactcgcctcctccaggttatcgcggagattgcaaga
tccgtgggatcaactgggatggctgccggtcagttccttgacttggaagggggacccaat
gcagttgattttgtgcaagaaaagaaatatggtgaaatggccgagtcctctgctgtctgc
ggtggcctgttgggcggcgcttcggatgaggaactccaactgctgagaaagtttggtcga
gctgttggcgtgctatatcaggtcagaagcgatgtgttgaaggcgaaaatagaaactcga
gacaaagacgaggacaagaggagtaagagttatgtaggagtatacggcgtggagaaggct
atggaagtggctgaggatctcaaagccgaggccaagaaagcattagagggcttagagaaa
tatggtgagagattgcttccgctctacagctttgtggattatgcggacgatagaggtttt
agtcttgatgcggggatttag
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