Coffea arabica (coffee): 113710930
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Entry
113710930 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113710930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113710930
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
113710930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
WHD_UBR1
DUF7863
Tau95
Motif
Other DBs
NCBI-GeneID:
113710930
NCBI-ProteinID:
XP_027089805
UniProt:
A0A6P6UG35
LinkDB
All DBs
Position
10e:1715489..1723963
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AA seq
298 aa
AA seq
DB search
MEDDGNGSNSTVVDTAKAERSVWLMKCPLVVSKSWQAQAAASSSSSVSDSPPASKVVVSL
DPLRPDDSLQFTMEMAGTGSDAGNMPKSYSLNMFKDFVPMCIFSETNQGRVAAEGKVEHK
FDLKPHNENMEEYRKMCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMVGLIASNSKDKK
KAAPVKGSDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVY
NKRGTNQGTYELKPEYKKSVEDTESAQSNFCQKDAGEYRPLQKRCCVQKLNFCRNYGD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggtaacggcagcaacagcaccgtcgtggacaccgccaaggcggagaga
tcggtgtggctgatgaagtgtccactagtcgtttccaagtcctggcaagctcaagctgcc
gcctcttcttcctcttccgtctccgattcacctccggcctctaaagtcgtcgtctctctc
gatcctcttcgtcccgacgactcactgcagtttactatggagatggctggaactggaagt
gatgccggaaacatgccgaaaagctactcgcttaatatgttcaaagactttgttcctatg
tgtattttctctgagacaaatcaaggaagagttgctgcagaagggaaagtcgaacataaa
tttgacctgaaaccacacaatgaaaacatggaagagtacagaaaaatgtgtcgtgagagg
acaaataaatcgatggtcaaaaatagacaaattcaagtgatcgacaatgatcgtggtgtg
cacatgaggcctatgcctggaatggtaggcttgattgcatccaattctaaggataagaag
aaagcagctccagttaagggatcagatgtcaagagaactagacgggatcgtggagaacta
gaagatatcatgtttaaactttttgaaagacaacctaattgggccttgaagcagcttgtg
caagagactgatcaacctgcgcaatttctgaaggagatactgaatgagctctgcgtctac
aataaaaggggtacaaaccaaggaacatatgagctgaagccagagtataaaaagtctgtt
gaggatacagaatcagctcaatcaaacttctgccagaaagatgcaggagaatataggcct
ttgcagaagaggtgctgtgtccaaaaactaaatttttgcagaaattacggagactga
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