Coffea arabica (coffee): 113710933
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Entry
113710933 CDS
T11342
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
carb Coffea arabica (coffee)
Pathway
carb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113710933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carb03400
]
113710933
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
113710933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
TIMELESS_C
VHS
Motif
Other DBs
NCBI-GeneID:
113710933
NCBI-ProteinID:
XP_071923593
UniProt:
A0A6P6UJ84
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All DBs
Position
10e:44092342..44097987
Genome browser
AA seq
674 aa
AA seq
DB search
MRTILVLSKMKTSKMEEEAREEGEGGREGKVVVVGLIEKATNSTRPEVDPRLLKAIKSAV
RYSDSELRLAAQTLTSLMKRDHSQVRYLALLIIDELFMRSKLFRTLLVENLDQLLTLSVG
FRRNLPLPAPAAVASVLRSKAIEFLEKWNTLFGIHYRQLRLGYDYLKNTLRYQFPNLQAN
AARIQQERREKEIRTKEILLKKFESLKENLPSIRDDIQSTVDEISECLDIIQNKDDNVPL
VPVDEEEIEEFHNAELRQIRLDSLREGEKLQENSENKVIFDALRELYKVLVTKHLAAVQE
WTSVLIRVEGADSRFRDNTLKELIDIRNHLQSVKRKCEVSGCALPKSTTSEEEDIWEEGT
LESHANVESFIEEKKSELCVASTSSKFEGKASEGSKSKLVAAKKLDGGYSHMEPNPVRSK
LMAEAPVLTWGSFLDNWGSNQDVLANQRGLEIENHWGRVDYDAVIPAEKIAELNLQAIVY
KEEPVEIQPCRAPLKKGGLCPRKDLRVCPFHGPIIPRDDEGRPINLTSSPELGGGNSSGE
EMSPDLVEKLVKQAVRNVRERDKEAAKKRHHDKQDLKRAKLAKVREHNEAVLRDAALAST
SRSSYIGEDTEAVSGPRSLPRNKRDTLASMLKRKETTKDRLAQKLLSTRAKDATVKQLTV
EEESNYKEAFPNQW
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactattctagtcctaagcaaaatgaaaacctcaaaaatggaggaggaggcgcgg
gaggaaggggaggggggaagagaagggaaggtggtggtggtcggtttgatagaaaaagct
acgaattctacgaggccagaagtggaccctcgccttctcaaagccattaaatcagctgtt
cgttactccgattccgagctccgactcgccgcccaaaccctaacgtccctcatgaaacgc
gaccactctcaggtacgataccttgcacttctcataatagatgagttgttcatgcggtca
aagcttttcagaactcttcttgttgagaacctagatcagttgctcacattaagtgtagga
ttcaggaggaatctgccgctgccagctcctgctgctgttgcatctgttctgcgttcaaag
gctattgagttcttggagaaatggaacacattatttggtatacattacaggcagctgagg
ctagggtatgactatctgaagaatacccttcgctatcaattccctaatttgcaagcaaat
gctgctcggattcagcaggaaaggagggaaaaagagattaggacaaaagaaatattgctg
aagaagtttgaaagcttgaaggaaaatctgccatcaatcagagatgatattcagtcaaca
gttgatgaaattagtgaatgtctggacattattcaaaataaagatgataatgtgcctttg
gttcctgtggatgaagaggaaatagaagaattccacaatgccgaactgcgacaaattcgt
ctagactccttgagagaaggtgaaaagcttcaagagaatagtgagaataaggtaattttt
gatgcattgagagaactatacaaagttctagtaacaaagcatttggctgcagtgcaagaa
tggacctctgtcctcataagggtggaaggggcagatagcaggttccgagacaacacattg
aaggagctcatagatattcgaaatcaccttcaatcggtgaagagaaaatgtgaagtttca
ggttgtgctcttcctaaaagtacaacttctgaggaagaagatatttgggaagagggtact
ctggaatcacatgcaaatgttgaatcatttattgaagagaaaaagagcgagttatgtgtt
gcatccacttccagtaagtttgaaggcaaagcttctgaaggcagcaaatctaagttggta
gctgccaagaaactggatggtggctacagtcatatggaacctaatcctgtgaggagcaag
ctaatggctgaagccccagttctgacgtggggttctttcttggataactggggctcaaac
caagatgtattggctaatcagaggggtttagaaattgaaaatcattggggtagggtagac
tatgatgcagtgattccggcagaaaaaattgctgagttgaatcttcaggcaattgtttac
aaagaggaacctgttgagatccaaccatgtcgggccccattgaagaaggggggcctttgt
ccaagaaaagacttgagagtttgtccatttcatggaccaatcattcctcgggatgatgaa
gggagaccaatcaatctgacttcaagtcctgagttggggggcggtaactcctcaggggaa
gagatgagtcctgatttagttgagaagctagtcaagcaggctgtgagaaatgttcgtgag
agagacaaagaggcagctaagaagagacaccatgacaaacaggatttgaaaagagcaaag
cttgcaaaagttagagaacacaatgaagcagttctacgtgatgctgcacttgcttcaact
tcaagatcttcatatattggtgaggatacagaggcagtcagcggcccaagatctttgcct
agaaacaagagagacactctcgcatccatgctgaaaaggaaagaaactactaaagacagg
ctagcccagaagctactgagtacccgtgctaaggatgctacagtaaaacagttaactgtg
gaagaggagtcaaattacaaggaagcatttccaaaccaatggtag
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