Coffea arabica (coffee): 113711136
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Entry
113711136 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K13210
far upstream element-binding protein
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113711136
03041 Spliceosome [BR:
carb03041
]
113711136
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113711136
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113711136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_NusA_2nd
RsgA_N
KH_BICC1_1st
Motif
Other DBs
NCBI-GeneID:
113711136
NCBI-ProteinID:
XP_027090108
UniProt:
A0A6P6UI02
LinkDB
All DBs
Position
10e:8230330..8237549
Genome browser
AA seq
726 aa
AA seq
DB search
MADEEVMVAAAGSGVQLSDHEKKRKLEDLETDVPEPLSGVDSHAKVDADKDGNAEEDDEL
ADLKRQRVEDNAENDQPAGLAPENGYDKSEQSEGGDADEQPTSVEDNAKLEDGDGQELAL
EASATVEDLAHGDEQNGNGDQPSVENERPAAGNEEESKKEGEEPSAEGDGSIVQQQSSSD
AETSKKIEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQIMRDADADPRAATRPVELIGTLD
SINKAEKMINDVIAEADAGGSPSLVARGFSTVQAVVGDQVEIQVPNEKVGLIIGKGGETI
KNLQTKSGARIQLVPQHLPAGDQSKERTVRVTGVMKQIEMAREMIKEVMNQTVRPSPLSG
GYNQQAIRPRGPVNPQWGNRGPYPGQFMGYDYQQRGSYPSQNPQYPAQPYGNYPPQGPRS
SFGHSWEQRPPAAMHGQPPQANYNYGQPQGPEYGQPAPYSQTPAPGYGQGYSEVKYDSQL
PAHHSYGGHGVPQSTGYPQGGGTHPGYGPQDQYGRSASYGMPPQAPHGQTYGQPRPNQPG
EMPYPASVSTQAYGSNVPPQQSYGYASSGPVQQSYPPYGSGHAADGYNHPAPAAAAGPGY
AQPSAQPVSGYGQPGGQQPSAYATGGYGSYPAQPGYTEQPAAANAGYGYQGASDAAYPAS
GAYGAPSAVQPGYGQPPPTQPGYDQSNPQTSGAYGTTPAPAGYAKSLSPQPGYPQYDSSQ
MYAAPR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggaggttatggttgctgcggcagggagcggggtgcaactttccgaccat
gagaaaaagcgcaagctcgaggatttggagaccgacgttccggagccactctccggtgtt
gactcgcacgccaaggtggacgcggataaggatgggaatgcagaggaggatgatgagttg
gcggacctcaaacgacagcgtgtggaggataatgctgagaacgaccaacctgctggcctc
gctccggagaatgggtatgacaagtcagaacagtctgaaggaggggacgctgatgagcag
ccaacaagtgtggaagataatgctaaattggaggatggagatggccaagaactagctctg
gaagcttctgcaacagtcgaagatctggctcatggagatgaacagaatggtaatggtgac
cagccctcagttgagaatgagagacctgcagctggaaatgaagaagagtccaagaaggaa
ggtgaggagccttctgcagaaggtgatgggtctattgttcagcagcaatccagttctgat
gctgaaacctcaaagaaaattgaggttcctaataataaggttggtgttttgattggcaag
gctggggatactattaggtttctgcaatataattcaggtgctaaaattcaaattatgaga
gacgctgatgctgatccgcgtgcggctaccaggcctgtggaactaattggaactctagat
agcataaacaaggcggagaagatgatcaatgatgttattgctgaggcagatgctgggggt
tctccttctcttgtggctaggggcttcagcactgtgcaggctgtagttggagatcaagtt
gagattcaagtcccgaatgaaaaggttggcttaatcattggaaaaggtggagaaactatt
aagaatttacagacaaaatctggagctcgtattcagttggtaccccagcatctcccagct
ggtgatcaatccaaagaaaggacagtgcgagttactggtgtaatgaagcagattgaaatg
gcaagggagatgatcaaagaagtcatgaatcagactgtgaggccatcacctctgtctggt
ggatataatcagcaggctatccgtcctcgtggccctgttaacccgcaatggggaaatcgt
ggtccttatcctgggcagtttatgggctatgattatcagcaaagaggatcatatccatca
caaaatcctcaatatccagctcaaccgtatgggaactatcctccccaaggacccagaagc
agctttggtcatagttgggaacagaggcccccagcagctatgcatggccagccaccgcag
gcaaattacaactatgggcagccacagggtccagaatatgggcagcctgccccttattcc
cagacacctgcaccgggctatgggcaaggatacagcgaagtgaaatatgatagccagttg
ccagcccaccattcttatggtggacatggggtacctcagtcaacgggttaccctcaaggt
ggtggtacccatccaggctatggtccacaggaccaatatggcaggtcagcatcatatggt
atgcctccacaggcgcctcatggccaaacttatggccagcctaggcctaaccaacctggt
gaaatgccttatccagcttctgtttcaacccaagcatatggttccaatgtgcccccacag
caatcatatgggtatgcatcaagtggtccagtgcagcaaagctatcctccttatggttca
ggacatgctgctgacggttataatcacccagcacctgcagctgctgctggtcctggttat
gctcagcctagtgcacaacctgtttctggttatggccagcctggtggacagcagccctct
gcttatgccacaggaggttatggttcatatccagcacagcctggttacactgaacaacca
gccgctgccaatgctggttatgggtatcaaggcgcatcggatgcagcgtatccagcttct
ggagcttatggtgccccttctgctgtccaaccaggctatggtcaaccacctccaacccag
ccaggctatgatcagtccaaccctcaaactagtggtgcttatggaactacacctgcacca
gctggttatgcgaagagtttgtcaccccagcctggttatccgcagtatgactccagtcag
atgtatgcggcacctcggtga
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