Coffea arabica (coffee): 113711619
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Entry
113711619 CDS
T11342
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
carb Coffea arabica (coffee)
Pathway
carb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113711619
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Motif
Pfam:
GH3
GH3_C
GH3_M
AAA_lid_NAV1
YfjL_C
Motif
Other DBs
NCBI-GeneID:
113711619
NCBI-ProteinID:
XP_071922895
UniProt:
A0ABM4VTN2
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Position
10e:48566473..48570237
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AA seq
600 aa
AA seq
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MSLPALDSTDSQALLELLEKMTADASQIQDDLLQQILTTNANTQYLKGFLNGYSDKQLFK
KAVPVVEYQDIEPFVDRIANGESSHLISSHPITELLLSSGTSGGKRKAIPTTAEEPRRRA
FYASLTATILNKHIEFWNQGKQMNFRFIMPEMTTLGGLVVTNAVSSNFRRSRIQNRSNCW
NNDTSPDQVILCEDIKQSMYCQLLCGLVQRDAVVRIGTTYASGFLRVIKFLEEHWQELCS
NIKTGNISDWVIDPGCQKAVSLILSQQMPDLADSIEIECRSGSWRGIVKRLWPRTKCIEV
VSTGTMTQYIPNLEFYCGGVPLVSMYYAASEGFFGLNLKPLSDPYNVSYTLVPWMAYYEF
LRLGHKQSATQDHSQDNDTNCMSTLGELVDLVNVQIGQQYELVVTTFTGLYRYRVGDVLM
VTDFRNNTPQFKVVQRRNVVLSIDSDKTTEEGLLKAVSKAMQILEPLGYLLTDYSSYADM
SCFPGHYVLFWELQMRENAGTAAVLERVQMEGCCNAVEESLDGMYKTLRRRSNVIDPLEI
RVVKRGTFDGLMDLFLSEGASLNQYKTPKRIKSEKGIQFLNSMVVETFFSRVLPAFPPTG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgccagctttggattcaacagatagtcaagcacttctggagcttttggagaag
atgactgctgatgctagtcaaatacaggatgacttgctgcagcagattttaacaacaaat
gcaaacacccagtatctgaaaggtttcttaaatggctactctgataagcaacttttcaag
aaggcggtgccggttgtagaataccaagatatcgagcctttcgttgatcggatagccaac
ggagagtcatcccacctaatatcttcacaccccattactgagctactcttgagctcagga
acttccggtggaaagcggaaagcgattccgacaacagctgaagagccaaggcgcagggca
ttctacgccagtctcactgctactatactaaacaagcacattgaattctggaatcaaggt
aaacagatgaactttcgattcatcatgccagaaatgactaccttgggtggattggtggta
actaatgctgtatcaagcaacttcaggaggagcagaattcaaaaccgttctaattgctgg
aataatgacactagcccagatcaggtgatattatgtgaagatatcaaacagagcatgtac
tgccaattactttgtggtcttgtgcagcgtgatgccgtagtgagaatcggaacaacttat
gcatccggatttcttcgcgtcatcaaattcttggaggagcattggcaagaactctgttcc
aacataaaaacaggaaatatcagtgattgggtcattgatcctggatgccagaaggctgta
tctttgattttgagccaacagatgcccgacttagctgattcaattgaaattgaatgtaga
tcaggatcatggagaggaatagtcaagaggctttggcctcgaaccaagtgcattgaggtc
gtcagtacagggactatgacccaatatatcccaaaccttgagttctactgtggtggggta
cctttagtttcaatgtactatgcggcttccgaggggttttttggtctcaacttgaagcca
ttgagcgacccttataatgtgtcttacactcttgtaccatggatggcctactacgagttt
ttgcgactaggtcataagcagagtgctacacaagatcacagccaagataatgatactaat
tgcatgagtacgctgggtgaactcgtcgatcttgtcaatgtgcaaattggtcagcagtat
gaactagtagtaactacctttacagggctttacagatatagagttggagatgttctcatg
gtaactgatttccgtaacaacacccctcaattcaaagttgtgcaacggcgtaatgtggtt
ttgagcatagactcggataaaacaaccgaagaaggcctcttgaaagcggtttcaaaagcc
atgcaaatccttgaaccacttggctaccttctcacagactacagcagctatgcagacatg
tcctgttttccagggcactatgtactcttctgggagcttcaaatgagagaaaatgcggga
acagctgcagtgcttgagagggttcaaatggaaggatgctgcaatgcggtggaagaatca
ttagatgggatgtacaagacactgcggaggcgaagcaatgtaatcgatccgttggaaatt
agagttgtgaaacgaggaacgtttgacgggctcatggacttgtttctttctgagggtgca
tctttgaatcaatacaagacgcctaagcgcattaaatctgagaagggcatccaattcttg
aactcaatggtggtggaaacatttttcagccgagtgttgcctgcctttcctccgacggga
tga
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