KEGG T11342: 113711884

Coffea arabica (coffee): 113711884

Entry

113711884         CDS       T11342

Name

(RefSeq) U2 small nuclear ribonucleoprotein B'' 2-like isoform X1

K11094

U2 small nuclear ribonucleoprotein B''

Organism

carb Coffea arabica (coffee)

Pathway

carb03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:carb00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113711884
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113711884
Spliceosome [BR:carb03041]
Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113711884
Complex B
    113711884
Complex C
   U2 SnRNP specific factors
    113711884

SSDB

Motif

Pfam:

RRM_1 RRM_5 RRM_SRRT DUF4523 xRRM RRM_ACIN1 DUF6445 RRM_YTH1

Other DBs

NCBI-GeneID:

113711884

NCBI-ProteinID:

XP_027090922

UniProt:

A0A6P6UMI2

LinkDB

Position

AA seq 231 aa
MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDIVALKTTKLRGQAWVVFS
EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIARAEGTYDKKKKQEEKAERKRRVEEA
QQNATPNGPRAESNGGPAASSRPGRPSAQEAVTDPNNILFIQNLPYETTSMMLDVLFKQY
PGFREVRMIEAKPGIAFVEFEDDIQSSVAMQALQGFKITPQNPMAISYAKK

NT seq 696 nt +upstreamnt +downstreamnt
atgctgaccggagatatacccccaaatcaaaccatttacattaagaacctcaacgagaag
gttaaaaaagaagagttgaagagatctctgtatgcattgttttcgcagtatgggaggatc
ctggacattgttgccctgaaaacaaccaaacttcgagggcaggcttgggttgtatttagt
gaagtgaccgctgccagcaacgcagtgcgccagatgcaaaattttccattttacgataag
cctatgcggatccagtatgcaaaaacaaaatcagattgtattgctagagccgagggtact
tatgacaagaaaaagaagcaagaagagaaagctgaaagaaagagacgtgttgaagaagct
caacaaaatgctactcctaatggtccaagagctgagagcaatggtggcccagctgcttcc
tctcgtccaggacggccgagtgctcaagaagccgttactgatccgaacaacatactcttc
atacagaatctaccatacgagacaacaagcatgatgctggatgtccttttcaaacaatac
cctggttttagggaagttcgaatgatcgaggcaaaaccaggtatagccttcgtagaattt
gaagatgatatacaatcttcagttgccatgcaggcactacagggcttcaaaattaccccc
cagaatcctatggcaatcagctatgcgaaaaaatga

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