Coffea arabica (coffee): 113712009
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Entry
113712009 CDS
T11342
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
carb Coffea arabica (coffee)
Pathway
carb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113712009
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
113712009
NCBI-ProteinID:
XP_027091087
UniProt:
A0A6P6UN18
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Position
10e:complement(14454503..14457174)
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AA seq
582 aa
AA seq
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MLPTFDPRDTEAGSRILEDITSNAGHIQEQVLEEILTKNASTDYLKSFLNGHSDKGLFKN
KIPVVDYEDIKIYIDRIALDGEPSRILTNESITELMISSGTSGGKQKWIPKTAEEGERRA
FFFCLLATVQNRYLHGLNDGKALFFVLINPDIHTPGGLVLRTTTASEIKNRKDRYPEVIL
CEDTNQSLYSQLLCGLVQRDAIVSIGTFFASGLQRIIKFFEEHWQEMSSNIRTGQMSDWI
TDPKCKRTVSLILSKQMPDLADSIDLVCQEKSWEGIIKKIWPRTKYVQAIITGSMAQYIP
ALEFYTGRLPVVSPAYVSSEACFGINFKPLCNPYDVSYTFIPNMAYYEFIPIGNHQDPNC
TNSKDAHLKDHIVDLANVKIGQHYELLVTTCTGLYRYRMGDILLVTGFHNTTPQFKFVQR
RNVVLSIDTDKTTEHDLQNAVTIAMHILEPLGFFLLDYSSYADTSSIPGHYVLFWELQLR
SNDDIPELDQVKMEKCCSLLEQSLDLEYKMLRNQSISTIGPLEIRVVKQGTFNVLVDFYV
SRGTSLNQYKTPKNIKSEKAIEILDSRVVGKFYSREVPNQDS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaacctttgatccaagagatactgaagctggttcgaggattttggaggatata
accagcaatgctggtcatatacaagaacaggtcctggaggagattttaactaaaaatgca
agcaccgattacttgaaaagttttcttaatggtcactctgataagggactattcaagaat
aaaattcctgtggtagattatgaagatatcaagatttacatcgatcgaattgcactggat
ggagagccatctcggattttaactaatgaatccattactgagctaatgatcagctcgggc
acttcaggtgggaagcaaaagtggattccaaaaactgctgaagagggagagcgcagggcc
ttctttttttgtctccttgctactgttcagaataggtacctccacggcttaaacgatggg
aaagcgctgttctttgtccttatcaacccggatatccacactcctggtggcttagtttta
agaacaactacagcaagcgagataaagaacagaaaagacagatatcctgaggttatattg
tgtgaagataccaatcagagcttgtatagtcaattactttgtggccttgtgcagcgagat
gcgatagtaagcattggtacatttttcgcctcgggtttgcaaaggataatcaaatttttt
gaggaacattggcaagaaatgtcttccaacataagaactggacaaatgagtgattggatc
actgaccctaaatgcaaaaggactgtctccttgattttgagcaaacaaatgccagatttg
gccgattcaattgatcttgtgtgccaagaaaaatcttgggaaggaataattaagaagatc
tggccaaggaccaagtatgtccaggccataattactgggtccatggcacagtacattccc
gcgcttgaattctatacaggaaggttacctgtagtttcaccagcctatgtttcttcagag
gcatgttttgggataaattttaaaccattatgcaatccttatgatgtctcatatactttt
ataccaaacatggcttactatgagttcataccaattggtaatcatcaagatccaaactgc
accaatagcaaggatgctcacttgaaagatcacattgtggatcttgctaatgttaagatt
ggccaacattacgaacttcttgtcacgacctgtaccggtttatacaggtacagaatgggg
gatattctcctggtgacaggttttcacaataccactccccaattcaaatttgtacaaagg
agaaatgtggttttgagcattgacacagataaaacaactgaacacgacctccagaatgca
gttacaattgcaatgcatatccttgaaccacttgggttctttcttttggattacagtagc
tatgctgatacatcctctattcctggtcactatgtactcttttgggagcttcaactcaga
tcaaacgatgatatacctgaacttgatcaggttaaaatggaaaaatgctgtagtttactg
gaacaatctctggacctggaatataagatgctgaggaatcagagcatcagtaccatcggt
cctttggaaattagagttgtgaaacaaggaacattcaacgtgctcgtggacttttatgtt
tctcgaggaacttctttaaaccagtacaagacacctaagaacataaagtctgagaaagcc
attgaaattctggactccagagtggtgggaaaattttacagcagagaagtacctaatcaa
gactcgtag
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