Coffea arabica (coffee): 113712181
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Entry
113712181 CDS
T11342
Name
(RefSeq) tubulin alpha-4 chain-like isoform X1
KO
K07374
tubulin alpha
Organism
carb Coffea arabica (coffee)
Pathway
carb04145
Phagosome
carb04517
IgSF CAM signaling
carb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113712181
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113712181
09142 Cell motility
04814 Motor proteins
113712181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113712181
03036 Chromosome and associated proteins [BR:
carb03036
]
113712181
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113712181
04147 Exosome [BR:
carb04147
]
113712181
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113712181
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
113712181
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
113712181
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113712181
Exosomal proteins of other body fluids (saliva and urine)
113712181
Exosomal proteins of colorectal cancer cells
113712181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF8666
DUF7281
Motif
Other DBs
NCBI-GeneID:
113712181
NCBI-ProteinID:
XP_027091278
UniProt:
A0A6P6ULC8
LinkDB
All DBs
Position
10e:complement(7173884..7176210)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGTADDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLFFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPKYTNLNRLISQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSFAPVISAEKAYHEQLTVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMFRGDVVPKDVNAAVATIKTKRTIQFVDWCPSGFKCGINYQPP
TVVPCGDLAPVQRAVCMISNSTSVAEVFSRIDHKFDLMYIKRAFVHWFVGEGMEEGEFSE
AREDLAALEKDYEEVGAESPEGDEGDGGDY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgcatttcagttcacattggtcaggccggaattcaggtcggaaatgcttgc
tgggaactttattgcctcgagcacggcattcaggctgatggccagatgccaagtgacaga
acagtgggaacagctgatgatgcattcaacacattcttcagcgaaactggagctgggaag
catgtccctcgtgctgttttcgtagatcttgagcctactgttattgacgaagtcaggact
ggaacttatcgccagctcttccaccctgagcaactcatcaatggcaaggaagatgctgcc
aacaactttgcccgtggccactacaccattggcaaagagattgttgatctttgcttggat
cgcatcaggaagctggccgacaactgcactggtcttcaagggtttttgtttttcaatgct
gttggtggtggcactggttctggtcttggatcacttctgctggagcggttgtctgttgac
tatggcaagaagtcaaagcttggtttcaccatctatccttctccccaggtctcaacttct
gttgtagagccctacaacagtgtgctgtcgacccattcccttcttgagcacactgatgtt
gcagtacttcttgacaatgaggccatctatgacatttgcaggcgctcgcttgacatagaa
cgcccgaaatacaccaatctcaaccgcctaatttcccaggttatctcctcactcactgca
tccttgaggtttgatggagccttgaacgttgatgtgactgaattccagaccaaccttgtg
ccctacccgaggatacattttatgctttcctcatttgctcctgttatttcagcggagaag
gcctaccatgagcaacttacagttgcggagataaccaacagtgcttttgagccatcttcc
atgatggccaagtgtgatccccgccatgggaagtacatggcttgctgcctgatgttccgt
ggtgatgttgtgccaaaagatgttaatgctgctgtggcaacaatcaagaccaagaggacc
atccagtttgtcgactggtgcccctccggattcaagtgtggtatcaactatcagccacca
actgttgtaccttgtggtgaccttgccccggtgcaaagggctgtgtgcatgatctctaac
tcaaccagcgttgccgaagtgttcagcaggattgaccataagtttgatcttatgtatatt
aagcgtgcatttgtgcactggtttgtcggtgagggcatggaagaaggtgaattcagtgaa
gctcgtgaggatcttgcagccttggagaaggattatgaggaggttggtgcagagtctccc
gagggagatgaaggagatggaggggactattaa
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