Coffea arabica (coffee): 113712188
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Entry
113712188 CDS
T11342
Name
(RefSeq) RING-H2 finger protein ATL74-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113712188
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113712188
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
113712188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
FANCL_C
Prok-RING_1
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-RING_4
zf-RING-like
Zn_ribbon_IFT122_C
DUF7270
HCMV_UL139
zf_RING_Vps8
Tmpp129
Motif
Other DBs
NCBI-GeneID:
113712188
NCBI-ProteinID:
XP_027091304
UniProt:
A0A6P6XIZ5
LinkDB
All DBs
Position
1e:50465370..50467028
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AA seq
170 aa
AA seq
DB search
MGNQQNRYHLPRHLLNGSDVATMALINETRSNPTSNDANFDSNMVIILAALLCALICALG
LNSIVRCALRCSRRFALETPEGVASRLASSGLTKDALRKIPVAVYKSGINIAATDCPICL
GEFSEGEKVRILPRCNHGFHVKCVDTWLLSHSSCPTCRQLLFGHPTPANT
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcaacagaatcgatatcacctgcctcggcacctcctcaacggatccgatgtc
gcaacaatggctttaatcaacgagacaagaagcaacccgactagtaacgacgcgaatttc
gacagcaacatggtgataatattggcagctttgctatgtgcattaatatgtgcgcttggc
ctaaattcaattgtgcgctgtgcattaaggtgcagccggagatttgccttggaaactccc
gagggtgtagcctcacgtttggcctcatcgggtctaaccaaggacgcgttacgtaaaatc
ccggtggctgtttacaagtcgggaatcaatatcgcagccacggattgtcccatatgcctg
ggagaatttagtgaaggagagaaagtacggattttgcccagatgcaatcatggtttccat
gtcaagtgcgtggatacgtggctactgtcgcattcatcctgtccaacttgtcggcagctg
ttgtttggacatcctactccggcgaatacttga
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