Coffea arabica (coffee): 113712401
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Entry
113712401 CDS
T11342
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113712401
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
113712401
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
113712401
NCBI-ProteinID:
XP_027091610
UniProt:
A0A6P6UL80
LinkDB
All DBs
Position
10e:7126042..7130819
Genome browser
AA seq
696 aa
AA seq
DB search
MSAQLTPSKRPNETEANGRGKWRKSGNFSSPNSSVNGTMLRVLCPSNKIGSVIGKGGSII
SQLREEAGAKIRVEEPVPGWDERVIVIASPDKGKENGGATAEEQQHQGSKEEDNGENGES
DRKDDGGEENKNDDEKEASPVEEVRGGGGEEDKETASAVQKALFLVVERMFEGDSEEKDG
AGEDEGHKDTSFVVRLLVFSSQIGGLLGKAGSVIKQMALESGAQIRILPRDKLPPPASPS
DELVQISGVPDAVRKALTSVSQQLLGNAPRDQRSQSSGPSSHSLGRPYRQEPFVQSNHAF
HGQGMPYSAGYRDAEGSFPDRMYPSQDILAFRLWCPHDKIGGVIGKGGTVVRAIQNETGC
EIKVLDAAADSEDRIIVISGPAHPDERISAPQDAVLRVQSRIFRSSSESQEKNVTAKLLV
SSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKDQNPQGALENEEVVQVNGELETVHEALL
QITSRLREHFFRDAFPSMNYPSNPAFLDQVPPFPPYLGRGEHSPPGMYPNLGPSFRKFDS
VGGLPPPGGFHPLDERPPFMQNFHRPGFPPHMSERFPPSAAWGPQGPIEAGGPMGLPDYA
GPPPRRIGGFGGGNHAAIITSTTVEVVVPRSVVPAIYGEDGGCLRQIRQISDAKITITDS
KPGATETVIIISGTPEQTNAAQSLIQAFVISETDAT
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaattgacaccatcgaagagaccgaatgaaacagaggcaaacggtagaggg
aaatggcgaaaatctggaaattttagttcaccaaattcttcagtaaatgggactatgttg
cgggtgctttgccctagtaacaaaattggtagtgttattggaaaagggggcagcattata
tcccaattgcgcgaagaagccggtgcgaaaattcgagttgaggagccagttccgggatgg
gatgagagagtaattgttattgcaagcccagataaaggaaaggaaaatggaggagctact
gctgaagagcagcagcaccaggggagcaaggaggaggataatggtgaaaatggggagtct
gatagaaaggatgatggtggggaggagaataagaatgatgatgagaaggaggctagtcct
gttgaagaagttcgaggaggaggaggagaagaggataaggaaaccgcttctgcggtgcag
aaagcgttgtttcttgttgttgaaagaatgtttgaaggggattcggaggagaaggacgga
gcaggggaggatgagggccataaagatacctcttttgttgtgaggttacttgttttttcc
agtcagattggtggtttgttagggaaagctggtagtgtaattaagcagatggctttggaa
agtggagcccagattcggattcttcccagagataaactgcctcctcctgcatctccttct
gatgaactggttcagatttctggggtgccagatgctgttagaaaagctcttacttctgtt
tctcaacaactacttgggaatgcccctcgggaccaacgttctcaatcctctggaccatca
tcccattcacttggccgtccttacagacaggaaccctttgtacaatcaaaccatgctttc
catgggcaagggatgccttattctgctggatatcgtgatgctgaaggcagttttcctgat
cgtatgtatccttctcaggacatattagcattccgtttatggtgtcctcatgacaagatt
ggaggtgtaattggaaaggggggaactgtagtcagggcaattcaaaatgagactggctgt
gagattaaagttcttgatgctgcagccgactcggaggatcgcataattgtaatatctggt
ccagcgcacccagatgaaaggatatctgcacctcaagatgcagtgcttcgtgtgcagtcc
agaatatttaggtcatcatctgaaagtcaagaaaaaaatgtgacagctaaacttcttgtc
tcctcaaatcaaatcggatgcctccttggcaaaggaggatccattattgctgaaatgagg
aagtctactggagcttatatccgtatactgggaaaggatcaaaaccctcaaggtgcttta
gaaaatgaagaagtagttcaggtaaatggagagcttgaaacggtgcacgaggcccttttg
cagataacttcaaggttacgggaacacttcttccgagatgcatttccttctatgaactat
ccttcaaatcctgcctttcttgaccaagtacctccatttccaccatatttgggaagggga
gaacattcacctccagggatgtatccgaatctaggtccatcatttcgcaagtttgattct
gtcggtggcctgcctcctccgggaggttttcatccacttgatgagcgacctccttttatg
caaaatttccacagaccaggattcccacctcatatgtcagaaagatttccaccttcagca
gcatgggggcctcaggggccaattgaagccggtggtccaatgggcttgcctgactatgca
ggacctcctcctaggaggattggtggatttggaggaggaaatcatgccgctattatcaca
agcactaccgtggaagttgtggttccgcgttctgttgttcctgcaatctatggtgaggat
ggtggatgtctgagacagatacgtcagatttctgatgcaaaaattactattactgattct
aaacctggggcaacagaaactgtgatcataatatctggaacaccagaacagactaatgct
gcacagagtcttattcaagcatttgtaatcagtgagacagatgccacttga
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