Coffea arabica (coffee): 113712428
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Entry
113712428 CDS
T11342
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
carb Coffea arabica (coffee)
Pathway
carb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
113712428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
carb03011
]
113712428
Ribosome [BR:
carb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
113712428
Bacteria
113712428
SSDB
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Paralog
GFIT
Motif
Pfam:
RLSB_S1
S1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
113712428
NCBI-ProteinID:
XP_027091650
UniProt:
A0A6P6ULB9
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Position
10e:complement(5546227..5552832)
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AA seq
517 aa
AA seq
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MPPLLHCCEYCSLANPSLPLRCAVIFNSATQTRAFFRSSKTPDKFNSKSFRNLSFRATDS
ILGTTRVLFCSKNEVFEDFKSAHVRPEIENFDELELLDKPFPKQMDDGSVTEIEEEELKK
DDKDDVLEEFYKFFKPRDELRQEIDVEEGGKGSQTGEGYQNEKVSIEYYEPKPGDLVVGV
VVSGNENRLDVNVGADILGTMLTKEVLPLYDKEINYLLCNLENDAEEFMVNGKAGIVKND
EAVSREAMPGRPVVAPGTLLYAEVLGRTLSGRPLLSTRRLFRRIAWHRVRQIKQLNEPIL
ITITEWNTGGLLTRIEGLRAFLPKIELMNKISNYTELKENVGCWLYVLIKRINEDTNDLI
LSEKDAWEVLNLREGTLLEGTVRKIFPYGAQIRIGETNRSGLLHISNITRGRIASVSNLL
EIDEKVKVLVVKSMFPDKISLSIAELESEPGLFLSNKEKVFAEAEEMAKKYRQKMPAVSA
AQKSDPLPANSIPFEDEENILANWKWFIFDKDGVPNP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgccgccactccttcactgctgtgagtattgctctttggctaatccatctttacctcta
agatgtgcagttatttttaactctgccactcaaaccagagctttcttcagatcctctaaa
accccagataaattcaactcaaaatctttcaggaacctgtcatttcgtgcgacagattca
attttgggaacaacccgtgttttattttgctctaaaaatgaagtctttgaggatttcaag
agtgcccatgtgaggcctgaaattgagaattttgatgagcttgaattgcttgataagcct
tttccaaagcaaatggatgatggttctgtaacagaaattgaagaggaagaattgaagaag
gatgataaagacgatgtcttggaggaattttataagttttttaagcccagagatgagtta
cggcaagaaattgacgtagaagagggtggaaaggggagtcaaactggagaaggttatcag
aatgagaaagtaagtattgagtattatgagcctaaaccaggtgatttggttgttggagtt
gtggtttcaggcaatgagaataggcttgatgtgaatgttggtgctgatatactagggaca
atgttgacaaaagaagtgctgccactgtatgataaagagattaattatttgttatgtaat
ttagagaacgatgcagaggagttcatggttaatgggaaggcggggattgtgaaaaatgat
gaggctgtgagtcgggaagcaatgccaggtaggccagtagtagcgcctggaacacttctt
tatgctgaggttctgggaagaacactcagtggccggccattattgtcaacaagacgactc
ttcagacgtattgcttggcatcgtgtgaggcagataaagcaactcaatgaacctattctc
atcacaataacagagtggaatactggtggtcttcttactagaatagagggtttacgtgcc
tttcttccaaagattgagttgatgaataagatcagcaattacactgagctgaaagagaat
gttggttgctggctctatgtgcttattaagagaataaatgaagatacaaatgatctgata
ctcagtgagaaggatgcttgggaagtccttaatcttcgagaggggacacttcttgaggga
acggtcaggaaaatttttccatacggtgctcagatcaggattggtgagactaacaggagt
ggattattgcatatctcaaacatcactcggggacgaattgcttctgtcagcaatttgttg
gaaattgatgagaaggttaaagttctagttgttaagtcgatgtttcctgacaaaatatct
ctgagtatagctgaacttgaaagtgagccagggttgtttctgtcaaacaaggagaaagta
tttgctgaagctgaagagatggcaaagaagtacagacagaagatgccagccgtttcagca
gcccaaaaatcagatcctcttccggccaactcaataccttttgaagatgaagaaaatatt
ctagcaaattggaaatggtttatatttgataaagatggcgtaccaaacccatag
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