Coffea arabica (coffee): 113712553
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Entry
113712553 CDS
T11342
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113712553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113712553
03009 Ribosome biogenesis [BR:
carb03009
]
113712553
Messenger RNA biogenesis [BR:
carb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
113712553
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
RNases
113712553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
113712553
NCBI-ProteinID:
XP_027091839
UniProt:
A0A6P6UMY4
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Position
1e:50791100..50796444
Genome browser
AA seq
244 aa
AA seq
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MDRLSNAFSLLELDATDDREHTTSFAAEAQGKKKDDSSGDTTTVNNDKNGPQSSEVPSGE
YKLPLVWIDLEMTGLNIEIDRILEIACVITDGSLTNSIEGPHLVIHQENDCLDRMGEWCQ
QHHAASGLTDKVLISTITECEAEKQVVEFVKKNVGTYTPLLAGNSVYMDFLFLKKYMPEL
ASLFSHVLVDVSSVKALCLRWYPRDNKKAPQKENKHRAMDDIKESIAELKYYKENIFKAS
KSRK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggatcggctctcaaatgcattttctttgctggaactggatgcaacggatgatagggaa
cacacgacctcttttgctgctgaagcccaagggaagaagaaagatgacagctcaggggat
acaaccactgttaataatgataaaaatggtccacaaagctcagaagtgccttctggagag
tacaagttgccacttgtgtggattgacctggaaatgactggtttgaacattgaaattgac
agaatcttggagattgcttgtgtaattacagacggtagtttgaccaattcaattgagggt
cctcatttggtcattcatcaagagaacgactgcctggatagaatgggagaatggtgtcaa
caacatcatgcagccagtggtttgactgacaaggtgctaatcagtaccatcaccgaatgc
gaagctgaaaagcaggttgttgaatttgtcaaaaaaaatgtgggcacatatacgcctctt
cttgcaggaaattcagtttatatggactttttgtttttgaagaaatatatgccggaattg
gctagtcttttctctcatgtacttgtagacgtcagcagcgtcaaggcactatgtctccgt
tggtatccaagagataacaagaaggctcctcaaaaagaaaacaagcacagagctatggat
gacatcaaagaaagtatagcagaacttaagtactacaaggaaaacatattcaaggcatcc
aagtctaggaagtga
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