Coffea arabica (coffee): 113712736
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Entry
113712736 CDS
T11342
Name
(RefSeq) transcription factor E2FC-like
KO
K06620
transcription factor E2F3
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113712736
Transcription factors [BR:
carb03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
113712736
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GFIT
Motif
Pfam:
WHD_E2F_TDP
E2F_CC-MB
TrmB
Motif
Other DBs
NCBI-GeneID:
113712736
NCBI-ProteinID:
XP_027092083
UniProt:
A0A6P6UNM2
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Position
10e:1295464..1300183
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AA seq
446 aa
AA seq
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MSTSGDGRGRDRHIDIDLNVSLNSSFGNLSLAASAVPPPPRLEPQHRFSVPVVPSSVCER
LDPFASIHSPPAAADPSAIINYCIAPNFLDIQPKDSFTSWNSPSLLGLPHTNEHGIFEAN
KGTSKTSSVHDITQAVNAASLKLPVSLLEAKQCSKARGSNHVKPGTLEPNAEVLDNVGVV
GSCRYDSSLGLLTKKFIKLIREAEDGCLDLNRAADLLEVQKRRIYDITNVLEGVGLIEKT
TKSHIRWKGYEMFGPEELNNQAIILKAEIECLFAEDCRLDDCTRKMVEKMNALVHAGTSQ
RTLYLTEEDIMSQPCFRNKTVIAVKAPHASTLEVPDPDEDIRFSERQYKLIVRSTIGPID
LYLLSNHGGHHEDVKVKRRKLLDSSVVNGCRQGADDAYYSDASGLQSSDVSGINKIIPSD
GAVNDDYWLRSDNAVTATDLWGTECS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctctggtgatggtagaggtagggatagacacattgacattgatttgaacgtt
agtttaaacagcagtttcggcaacttatccctcgcagcttctgctgttcctccccctcct
cgtttggagccacaacatcgtttctcggttcccgtggtcccgtccagtgtctgtgaacgg
ctcgacccttttgcctccatacattctcctcctgctgctgctgatccctctgctattatc
aattactgcatagctcccaattttctagatattcagcctaaggactccttcacaagttgg
aattcaccttcacttctcggtcttccgcatacgaatgagcatggcatctttgaagctaat
aaaggcacaagtaaaactagctcggttcatgacattactcaagctgtaaatgccgcttca
cttaagctgccagtatctctccttgaagctaagcaatgcagcaaagcaagaggctcaaat
cacgtgaaaccaggaacgttggaaccaaatgcagaggttcttgacaatgtgggcgtggta
ggtagctgccgatatgacagctctctaggcttgttgacaaagaagttcattaaattgata
cgggaagctgaggatggatgccttgatctcaatagagctgcagatctgttggaggtacag
aaaaggcgaatatatgatattacaaatgtccttgaaggagtaggattaattgaaaagact
acaaagagtcacatacgttggaagggatatgagatgtttggaccggaagagttgaataat
caagcaatcattctgaaggctgaaattgaatgtttatttgctgaagattgcaggcttgac
gattgcacaaggaaaatggttgagaagatgaatgccctagtgcatgctggaacttctcaa
aggaccctttatttgactgaggaagatatcatgagccagccatgtttcaggaataaaact
gttatcgctgtaaaagctccacatgctagtactcttgaagttcctgatcctgatgaagat
atcagattctcagaaaggcagtacaaacttattgttcgaagcaccattggacctattgat
ttgtatctcttgagcaatcatggaggacatcatgaggatgtgaaggtcaagcgcagaaaa
ttattggattcatcagttgtgaatggttgcagacaaggggcggacgacgcgtattattca
gatgcgtctggtttgcagagctctgatgtatctggcattaataaaataatcccatcggat
ggggctgttaatgatgactactggctgcgatcagataacgcggtcactgctacagatctg
tggggtacagaatgttcttag
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