Coffea arabica (coffee): 113712891
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Entry
113712891 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K14574
ribosome maturation protein SDO1
Organism
carb Coffea arabica (coffee)
Pathway
carb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113712891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113712891
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113712891
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GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
Orthoreo_P17
Dehydratase_SU
SchA_CurD
Motif
Other DBs
NCBI-GeneID:
113712891
NCBI-ProteinID:
XP_027092315
UniProt:
A0A6P6UNB7
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Position
10e:45494364..45498056
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AA seq
356 aa
AA seq
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MSKTLVQPIGQKRLTNVAVVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
NVSKGVLAKSKDLVKAFGTDDQAKICLEILEKGELQVAGKERESQLLSQFRDVATIVMQK
TVNPETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRSPMRLRLTV
PEQNILDLLEKLNGWNVNVVSRDEAGSQISIICEMDPSLFRDCDAVVRNMHGRSEILAVN
VHVDSDTHVDHYDDHEDEPSSLRRGYTDPIHQLSDQMQNQTISKTGSSSRELKQNKCSTC
NAFVGDSKEYREHFKSEWHKHNLRRKTRQLPPLTAEECLADLELGDSKADLKDYSF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagacgctggtgcagcccataggccaaaaaagactgacaaacgtagcagtagtt
cgcctcaagaaacatggcattcgattcgaaatcgcttgctacaagaacaaagtcctctct
tggcgttccggcgtagagaaggatttggatgaagttttgcaatcccagactgtttattcc
aatgtttcaaagggggttttggctaagtccaaggatttagtcaaggcttttgggactgat
gatcaggccaaaatctgtctggagattttggagaagggagagctacaagttgctgggaag
gaaagggagtcgcagttgttaagtcagtttagagatgtagctaccatagttatgcagaag
actgttaatcctgaaactcagcgcccttataccataagcatgattgagcgtctgatgcat
gaaatccattttgctgtggatccaaatagcagctcaaagaaacaggcattagaagtcatt
cgtgagcttcagaagcactatcctataaaaaggtctcctatgaggttaagattaactgtc
ccagaacagaatattttggatctcctggagaaactcaatgggtggaatgttaacgttgtt
tcaagagatgaagctggaagtcaaatttccattatctgtgaaatggacccaagccttttt
cgggattgtgatgctgttgttaggaatatgcatgggaggtcagaaattctggccgtaaac
gtgcatgtggacagtgacacccacgtggatcattatgatgaccatgaagatgaaccatcg
agcttgcgcaggggttataccgatcccattcatcaactgagcgatcaaatgcagaatcag
actatttcaaaaactggaagctccagtagagaactaaagcagaataagtgcagtacatgt
aatgcttttgtgggtgattcaaaagaatacagggagcatttcaagagtgagtggcataaa
cataatctaaggagaaaaactaggcaactcccacctcttacagcagaagaatgcttggct
gatttggagcttggggattccaaggctgatctgaaggactattcattttga
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