Coffea arabica (coffee): 113712977
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Entry
113712977 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K03243
translation initiation factor 5B
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
113712977
Translation factors [BR:
carb03012
]
Eukaryotic type
Initiation factors
eIF-5
113712977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
113712977
NCBI-ProteinID:
XP_027092462
UniProt:
A0A6P6URZ7
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All DBs
Position
10e:complement(46667552..46680528)
Genome browser
AA seq
1423 aa
AA seq
DB search
MGRKKPSARDDEVAGATQGGVGGGKPKKKNLVIDDDEYSVGTELSEESNVQEEKTATVGG
GKKKGKKGNAKKGGLKEDDDDDDHPEERIDDKEHDEALDIQFAGKKKGKAKKGGNNKSNS
VFSSGNFGLLGDEDGETEVSELTQSRDGESGGSEDDGENVVAFTGKKKPTKSKKGGGKSV
FSAAPFDAIGVEDDEAVGGSVSGELSDKDDETVIAFSGKKKPSKSGKKGGSGAFTTSPFG
AIGDGDDGGVDDLVSGQQSDNGEPLIEFSGKKKPSKTGKKGGGSLFSTSSFNGLEDGENK
EESKEEDEDIASITFTGKKKKSSKSSKKSSANSFDAAVLDEETIEEVSMSKSGAEAAGDG
ASALDELDTSVAMFSGKKKSSKKKGSGAITALDAGTGDESLVVAEADQPSVSDSSKQIAE
DVAETLKNKKKKKKSGRTAQEEEDLDKILAELGEAPPVSKPSPTPTPGLLEPTAEEKVQS
QLEQEDGAGEKEAEEGGPAESAAAKKKKKKKEKEKEKKAAAAAPVTEDKQEDSKNETKGK
ASDKKVPKHVREMQERLARLKEAEERKKREEEEKLRKEEEERRRQEELERLAEEKKRLKK
EREKEKLMKKKQEGKLLTGKQKEEARRLEAMRKQILANAGGLPLPTGDAVGVPTKRPKYQ
TKKSKPASQANGAAVAEAPESQEIKESEIGSEVDSVETEKYEEVQVLEVEKPQEVEVEEE
NEVEVEEEDDDEEWDAKSWDDADLKLPGKSAFADEEVDSEPENVGKKELKSTRPATNDAG
SRPLASKTATAPLKSVNPEVGAVEKQKQREAPTKMDAAEPVALPTRGENNLRSPICCIMG
HVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAGNIRERTKELKADAKLSVPGLLV
IDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDR
LYGWKTCRNAPIMKAMKQQSKDIQAEFNMRLTQVITQFKEQGINTELYYKNKEMGETFSI
VPTSAISGEGIPDLLLLLVQWTQKTMVEKLTFQDEVQCTVLEVKVVEGHGTTIDVVLVNG
VLHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYVHHKEIKAAQGIKITAQGLEH
AIAGTGLYVVGPDDDVEDIKEAAMEDMRTVMNRIDKSGEGVYVQASTLGSLEALLEFLKT
PVVNIPVSGIGIGPVHKKDVMKASVMLEKKKEYATILAFDVRVTPEARELADELGVKIFC
ADIIYHLFDQFKAYIDNLKEEKKKEAADDAVFPCVLKIIPNCVFNKKDPIVLGVDVLEGV
AKIGTPICIPQKDFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNPEEQQKMFGRHFE
IEDELVSHISRRSIDILKANYREDLSLEEWKLVAKLKNLFKIP
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaagaagccgagtgctcgtgatgatgaggtggccggggcgacgcagggtggc
gttggtgggggcaagcctaagaagaagaatttagtgattgatgatgatgagtattcagtt
gggacagagttgtctgaggagagtaatgttcaggaagagaagactgcaacggttggtggt
ggtaagaagaagggtaagaaggggaatgcaaagaaaggaggattaaaagaagatgacgat
gatgatgaccatccggaggagagaattgatgacaaagagcatgatgaggcactggatata
cagttcgcaggcaaaaagaaagggaaggcgaagaagggtgggaacaataagagcaacagt
gtctttagttctgggaactttgggttgttaggggatgaagatggtgaaactgaggtttct
gaattaactcagagtagagatggtgagagtgggggtagtgaggatgatggggagaatgtg
gtcgcctttactggtaagaaaaagcctacaaagtcaaaaaagggtggtggtaaaagtgtg
ttcagtgctgcaccatttgatgctattggagttgaggatgatgaagcggttggaggttcg
gtttctggagagctgtctgataaggatgatgagacagtgattgcattttctgggaagaaa
aagccatcaaaatctggtaagaagggtggcagtggtgcatttacgacatcgccttttggt
gcaattggtgatggggatgatggaggtgttgatgatttagtttctgggcaacagtctgat
aatggggagcctttgattgagttctctgggaagaagaagccatcgaaaacaggtaagaag
ggtggtggtagtttgttttcgacatctagttttaatgggcttgaggacggggaaaacaaa
gaagagagtaaagaggaagatgaggatattgcttctattaccttcacaggaaagaaaaag
aagtcttccaagtcttcgaaaaaaagcagtgctaattcatttgatgctgcagttcttgat
gaagagaccattgaagaagtttctatgtccaagtcaggagctgaagcagcaggagatggt
gccagtgctctggatgaattagacacatcagttgctatgttttctggtaagaagaagtca
tctaaaaagaagggtagtggcgcaattactgcacttgatgctggaactggggatgagtcc
ttggttgtagctgaggctgatcagcctagcgttagtgatagttcaaagcagatagctgaa
gatgttgcagagactttgaaaaataagaagaagaaaaagaagagtggaagaactgcccaa
gaagaggaggatttggacaagattcttgctgaacttggagaagcgcctcctgtatcaaaa
ccttctcccacccctacacctggtcttctggagccaactgctgaggagaaagttcaatct
cagcttgagcaagaagatggtgcaggtgaaaaagaagctgaagaaggagggcctgcagag
tctgcagcagcaaagaagaagaagaagaagaaggaaaaggagaaagagaaaaaagcagct
gcagctgcacctgtgacagaagacaaacaagaagatagtaaaaatgaaaccaagggtaaa
gcttcggacaagaaagttccaaagcatgtgagagagatgcaagagagacttgcaagactt
aaagaagctgaagaaaggaaaaaaagggaagaagaggagaagttaagaaaagaagaagag
gagcgtcgtaggcaggaagaacttgagaggctagcagaagaaaagaaacgcttgaagaag
gagagggaaaaagagaaactcatgaagaaaaagcaagaagggaagctattaactggtaaa
cagaaggaagaagctcgtagattggaggcgatgaggaaacagatactagccaatgctggg
ggcttgccattacctacaggggatgctgttggggtgcctacaaaacggcccaagtaccag
acaaaaaagtcaaagccagcttctcaagcaaatggtgcggctgttgcagaggctcctgaa
agccaagaaataaaagaatcagaaattggatctgaggtcgactctgtggaaacagaaaag
tatgaggaagtgcaagttttggaagtagagaaaccccaagaagttgaagttgaggaggag
aatgaggttgaagtagaagaagaagatgatgatgaagaatgggatgccaaaagttgggat
gatgctgatcttaaactgcctggtaaaagtgcttttgctgatgaagaggttgattctgag
cctgaaaatgtgggtaaaaaggagttaaagagcacaaggcctgctacaaatgatgcaggg
tctcgccctttggcgtcaaagactgcaactgcaccactaaaatctgtgaatcctgaggtt
ggggctgtcgaaaaacagaagcaacgagaagcacctactaaaatggatgctgcagaacca
gttgctctccccacccggggtgaaaataatctccgctcgcctatttgctgcattatgggc
catgttgatactggcaaaactaagttacttgactgcattcggggtaccaatgttcaggaa
ggagaagctggaggtattactcaacaaataggtgcaacatatttcccagcagggaatata
cgtgagagaaccaaggaactaaaagctgatgcaaagctgagtgtcccaggtttattggtt
attgacactccaggacatgaatcgttcaccaacttgcgttctcgaggctcaggtttatgt
gatattgctattctcgttgtggatattatgcatgggttggagccacaaactatcgaatca
ctcaatcttttgaagatgaggaatacagaatttattgttgccctgaataaggttgacaga
ctctatggatggaaaacatgcagaaatgcacctatcatgaaggccatgaagcaacagtca
aaagatattcaagctgaattcaacatgaggctcactcaggttattacccagttcaaggag
caaggaataaacactgaattgtactataagaacaaagaaatgggggagactttcagcatt
gtgcctactagtgcaatcagtggtgaagggatcccggacttgcttttattacttgttcaa
tggactcaaaagacaatggttgagaaattaacttttcaggatgaagtgcagtgtaccgtt
ttggaggttaaggttgttgaaggacatgggacaacaattgatgtggtcttagttaatggt
gtgctccatgaaggagatcaaatagttgtttgtggcatgcagggtccaattgtcaccagt
attcgagcactattgacgccccatccaatgaaagaactccgagtaaagggaacttatgtg
catcataaagaaatcaaggctgcccaggggataaagatcactgcacagggtcttgagcat
gctattgctggcactgggctatatgttgttggtcctgatgatgatgtagaagatattaag
gaagcagctatggaggatatgaggacagtgatgaacagaattgataaaagtggcgaggga
gtttatgtacaggcctctacccttggttcattagaagcactactggagtttttgaagact
ccggtggtcaatatacctgtgagtggtataggcattggtcctgtgcataagaaagatgtc
atgaaggcaagcgtgatgctcgagaagaagaaagagtatgccactatcttggcctttgat
gttagggtgactccagaggctcgagaacttgcagatgagcttggtgtcaagatattctgt
gcagatatcatctatcacctatttgatcagtttaaggcttatattgacaacctcaaggag
gagaagaagaaggaagctgctgatgatgctgtattcccctgtgttcttaagatcatacca
aactgtgttttcaacaagaaagatcccattgtattgggagtggatgttctcgaaggtgtt
gcaaagatcggaaccccaatttgcattcctcagaaggacttcatcgacattggacgaatt
gcgtccattgagaacaaccataaacctgttgactatgccaagaaaggccaaaaggtggcc
atcaagattgttggcagtaatcctgaggagcaacagaagatgtttggaaggcactttgag
attgaagatgagcttgtcagccatatctcaaggaggtcaatcgacatactaaaagccaac
tacagggaagatctgtctcttgaagaatggaagctggttgcgaagcttaaaaatcttttc
aagataccgtag
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