Coffea arabica (coffee): 113713067
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Entry
113713067 CDS
T11342
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
carb Coffea arabica (coffee)
Pathway
carb03430
Mismatch repair
carb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113713067
03460 Fanconi anemia pathway
113713067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carb03400
]
113713067
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113713067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
vWF_A
Motif
Other DBs
NCBI-GeneID:
113713067
NCBI-ProteinID:
XP_027092579
UniProt:
A0A6P6UPU3
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Position
10e:complement(9666115..9680040)
Genome browser
AA seq
746 aa
AA seq
DB search
MEAGSAETEQPLEMEVEEEEVAPIYKEPPKIKLLEESVVNRIAAGEVVQRPVSAVKELVE
NSLDADSTSISVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSHFEDLQTIQSM
GFRGEALASMTYVGHVTVTTIMKGQLHGYRATYRDGVMEQEPKPCAAVKGTQIMVENLFY
NMIARRKTLQNSADDYPKIVDLLSRFAIHHINVSFSCRKHGAARADVHSVATSSRLDAIR
SVYGVSVARNLIKIEAFDDESSSSVFKMEGFISNSNYIGKKITMVLFINNRLVECGALKR
AVEIVYSATLPKASKPFIYMSIILPSEHVDVNVHPTKREVSLLHQEIIIEKIQSAVESRL
RNSNECRTFQEQTVDASTSSLLATQKDSPKNRTPPSSQTPKSEKVPVHKMVRIDSLDPAG
RLHAYLQATPSSQADKSSLASIRSAIRQRRNPRETADLTSVQELVNIIDSNYHSGLLDTI
RNCTYIGMADEVFALIQHNTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDPAPLADL
LMLALKEEDLDAEGEENYDLKEKIAEMNIQLLKQKAEMLQEYFGIHIDTNGNLSRLPVIL
DQYTPDMDRVPEFVLCLGNDVDWDDEKICFQTIAAALGNFYAMHPPLLPNPSGEGLQFYK
RRVSSNCHQAGGGSSKDADDAAVESEYDDELLADAENAWAHREWSIQHILFPSMRLFFKP
LTSMASNGTFVRVASLEKLYKIFERC
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaagcgctgaaaccgaacaacctctagaaatggaagttgaagaagaagag
gttgctccaatttataaagagccgccgaaaattaagctactggaggagtcggtagttaac
agaatcgccgccggagaggttgttcagaggccggtgtccgccgtgaaagagctcgtcgag
aatagcttggatgctgactccacatctatctccgtcgtcgtcaaggacggtggactcaaa
ctcattcaagtttccgatgacggacacggcatccgatatgaggatttgccaatattatgt
gaaaggcatacaacttccaagttgagccattttgaagatttacagaccatacagtcaatg
gggtttagaggtgaggccttagctagcatgacttatgtgggtcacgtgacggtcactacc
attatgaagggtcagttgcatggctacagggcgacttacagagatggtgtcatggagcaa
gaaccaaaaccatgtgcagctgtgaaggggactcaaataatggttgagaatttattttat
aacatgattgctcgtcggaaaacacttcaaaattcagctgatgactatccaaaaattgtg
gatttgctgagtcggtttgctattcatcacatcaatgtgagcttttcttgcagaaagcat
ggagctgctagagcagatgttcactctgtggcaacatcttctaggcttgatgcgatcaga
tctgtttatggagtttctgttgctaggaatctgataaaaatagaagcttttgatgatgag
tcgtctagttcagttttcaaaatggaaggtttcatctcaaattcgaactacattggaaag
aagataacaatggtgcttttcatcaataatagactggtggagtgtggtgctctaaagagg
gcagttgaaattgtttattctgctacattgcctaaagcatcaaaaccttttatatacatg
tcaatcatattgccttctgagcatgttgatgtgaatgtacacccgacaaagagagaggta
agtctgttacatcaagaaataatcattgaaaagatacagtctgcagttgaatcaagactg
aggaactctaatgagtgcaggacattccaagaacagacagtggatgcatctacatctagt
cttctggctacacagaaagactcccccaagaatcgcactcctcctagttcacagacacca
aaatcagaaaaagttccagtacataaaatggtgcgcatagattcgctagatcctgctggc
aggctgcatgcttacttgcaagcaacaccttcaagtcaggcagataaaagttccttggcc
tctataaggtctgccattagacaaaggaggaatcctagggaaactgctgatcttacaagt
gttcaggagcttgtcaacattattgacagtaattatcactcaggtctcctggacactatt
aggaactgcacatatatcgggatggcagatgaggtttttgcactgattcagcacaatact
cacctttatcttgcaaatgttgttaacttgagcaaagaactcatgtatcagcaagtcttg
cgacgattcgcccattttaatgcaatacagttgagtgatccggctcctctagctgatctc
ttaatgctagctctgaaagaggaggacttagatgcagaaggggaagagaactatgatctg
aaagaaaagattgctgaaatgaatatccagttgctcaagcaaaaagctgaaatgctacag
gagtatttcggcattcatattgacacaaatggtaacttgtctaggcttcccgtcatacta
gatcagtacacgcctgacatggaccgtgtccctgaatttgtgctttgtttgggaaatgac
gttgactgggatgatgagaaaatatgtttccaaacaattgctgctgctcttgggaacttc
tatgccatgcatcctcctttgttgcctaatccatcgggtgaaggactgcagttttacaaa
agaagagtttcttcaaactgtcatcaagcaggaggaggatcctcgaaagatgcagatgat
gctgccgtggaatcagaatatgatgatgagctacttgcagatgctgagaatgcttgggct
catcgtgaatggtcaatacaacacattttatttccatccatgagactgttttttaagccg
ctgacttcaatggcttcaaatggaacttttgtacgggttgcttcacttgagaaactttac
aagatcttcgaaaggtgttga
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