Coffea arabica (coffee): 113713283
Help
Entry
113713283 CDS
T11342
Name
(RefSeq) floral homeotic protein PMADS 2
KO
K09264
MADS-box transcription factor, plant
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113713283
Transcription factors [BR:
carb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
113713283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
TMF_DNA_bd
Atg11_middle
DivIC
NET2A_C
Motif
Other DBs
NCBI-GeneID:
113713283
NCBI-ProteinID:
XP_027092769
UniProt:
E9JTW3
LinkDB
All DBs
Position
10c:49740929..49743637
Genome browser
AA seq
210 aa
AA seq
DB search
MGRGKIEIKRIENTNNRHVTYSKRKTGIMKKAKEITVLCDAKVSLIIFGTSGKMHEYISP
STNLVEMLDAYQRSTGKKLWDAKHENLSNEIDRVKKENDSMQIELRHLKGEDITSLNYKE
LMVLEDALENGLAGLRNKQSEIIKMIRKTGEMLEEENKQLQYIWHQQEMANMKGAIGERD
DVYQRVRDYPSQMPFAFRVQPMQPNLHERI
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggtaagattgagatcaagaggattgagaacacaaacaacaggcatgtgact
tactcaaagagaaaaactgggatcatgaagaaggctaaggagatcacagttctttgtgat
gctaaggtttccctcatcatcttcggtacttctggaaagatgcatgaatatataagtcct
tcaacaaatttggttgaaatgttggatgcttaccagaggtctactggaaagaagctgtgg
gatgctaagcatgagaatttaagcaatgaaattgatagagttaagaaagagaacgacagc
atgcagattgagctcaggcacctaaagggggaagacatcacatctttgaattacaaagag
ctcatggttttagaagatgccctagaaaatgggcttgcaggtttacgcaacaaacagagt
gagatcatcaagatgatcaggaaaactggggaaatgctggaggaggagaataagcagctt
caatacatatggcaccaacaagagatggcaaatatgaagggtgctattggtgagagggat
gatgtttatcaaagggtcagagactacccatcccagatgccttttgccttccgggtgcag
ccaatgcagccaaatcttcatgagaggatttag
DBGET
integrated database retrieval system
