Coffea arabica (coffee): 113713473
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Entry
113713473 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase ATL23-like
KO
K19037
E3 ubiquitin-protein ligase ATL23 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113713473
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113713473
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
113713473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zinc_ribbon_16
DUF1272
zf-RING_16
zf-RING_4
zf-Vps39_C
zf-RING-like
Tmpp129
RINGv
Prok-RING_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
113713473
NCBI-ProteinID:
XP_027093001
UniProt:
A0A6P6URN5
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All DBs
Position
10c:complement(2382979..2384717)
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AA seq
136 aa
AA seq
DB search
MLVSVFLALFLPCAGMSVVFLVYICLLWYAASNNSNYSSNNQQLQSPVKPPKGNGLSASD
LEKLPKTTGKDLVLGAECAVCLDDIEGDEPARLIPGCNHGFHLQCADTWLSKHSVCPVCR
AKLQPELFDPPETNPC
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgttggtttcggtgtttcttgccctgtttttaccatgcgctggcatgagcgtggttttc
ttggtgtacatatgcctgctatggtatgctgccagcaacaacagcaactacagctccaat
aaccagcagttgcagtctccggtgaagccgccaaaagggaatggcctttccgcctccgac
cttgaaaagctccccaaaactaccgggaaagatttggttttgggagcagaatgcgctgtg
tgtttggatgatatagagggtgatgagccggctagactgatccccgggtgcaaccatggt
tttcatctgcagtgtgcggatacctggctctctaagcactctgtttgccccgtttgtaga
gctaaacttcagccggagctatttgatcctcctgaaaccaacccttgctaa
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integrated database retrieval system
