Coffea arabica (coffee): 113713489
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Entry
113713489 CDS
T11342
Name
(RefSeq) peroxisomal ATPase PEX1-like isoform X1
KO
K13338
peroxin-1
Organism
carb Coffea arabica (coffee)
Pathway
carb04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113713489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113713489
Membrane trafficking [BR:
carb04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
113713489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_5
RuvB_N
NPHP3_N
AAA_2
AAA_22
RNA_helicase
AAA_25
NACHT
IstB_IS21
nSTAND3
AAA_18
Mg_chelatase
AAA_7
AAA_19
AAA_24
AAA_14
Bac_DnaA
NB-ARC
PhoH
AAA_lid_PRS2_C
CDC48_2
DUF7320
Motif
Other DBs
NCBI-GeneID:
113713489
NCBI-ProteinID:
XP_027093019
UniProt:
A0A6P6UR50
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Position
10c:49902046..49908917
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AA seq
1140 aa
AA seq
DB search
MEFEVRVVGGIESCFASLPLSLIHTLQSTSISGSLPPLLPLELRSIRNHDKLWHVSWSGC
ASSSSAIEIAQLYAECIELLDRTVVQVKVTPNVPKATLVTIEPHTEDDWEILELNSEHAE
EAILKQVGIVHEAMRFPLWLHGQTSVTFLVVSTLPKNPVVQLVPKTEVAVAPKRRKRNSD
SHKDSSIPTSESRHPETKALLRVQDLDKKYVSRHNVHGVEMEVSLTSAVFLHPETASRYS
FNSLQLLLMVRRPLSKENKSNDGKDNLRMRGSRMEKEANNGNSIDKQEHSQAVVRLLISE
SVAKGHVMLSQPLRFYLRAGLHSWVYVKTWSGSLKQDIPFIKLSPCQLEKLHEDEAFEND
GTDVLVGQKNFKAKQMLFRTNSGAEMGMIDWSIHERIIAALFNKSPGDEDQKDGTESGIK
KGLLTFLQAWCQAQCDAIISNSGLQVSSLMLGSKTLVHFTVEGKFFDHPGKLQGPKDGLF
KRQHKAGERSADILFILSITDESMHAKKMDAYEISFDHRKENGEDKSLESLLPKLHLSDG
VCIYAVNEQVSDKNSGLAISSLNWMGTAASDVINRLTALLSRNSVLMLSNYDLPLPGHVL
IYGPPGSGKTLLATVAAKSVQDNVEILAHVVNVCCSRLTSEKHSNIRQALSGYISEALDH
APSVVIFDDLDSLISSSSNPEVQQQSLYSVGLTQFLLDIMDEYEEKQGRMCGIGPIAFIA
TAQSLTNVPQTLSSSGRFDCHVKLPAPAAAERAALLKHEFQKRHLECHDDVISDIASKCD
GYDAYDIEILVDRSVHTAVGRFLSSDLGSKEQVKPTLVRDDFLHAMHEFLPVAMRDLTKP
PSEGRHSGWEDIGGLDDIRNSIKEMIELPSEFPNIFAQAPLRMRTNVLLYGPPGCGKTHI
VGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRG
HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSE
HERLDILRVLSRKLPLAGDVDLGFVARMTEGFSGADLQALLSDAQLEAVHDLLGNEDDKR
SKKMPIISDTLLKSIASKAKPSVSESEKRRLYDIYRQFLDSKRSIAAQSRDAKGKRATLA
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgaggtgagagtggtaggaggaatagagagctgctttgcttctctgccactt
tctttaatccatactcttcaatccacctctatctccggttccctccctccacttctccct
cttgaacttcgttcaatccgcaatcatgataaactctggcatgtttcttggtctgggtgt
gcttcatcttcttcagccatagagattgctcagctgtatgcagagtgtattgagttgtta
gaccgtactgttgttcaagtaaaggtgaccccaaatgttccaaaagctactctggtgact
atagagccacatactgaggatgattgggagattctggagcttaattccgagcatgctgag
gaagcaattttgaagcaggtgggaattgtgcatgaagcaatgagatttcctttgtggttg
catgggcaaactagtgttacatttcttgttgtctcaaccttgccaaagaatccggtagtt
caactcgtcccaaaaactgaggttgctgttgctccaaaaaggcgtaaaaggaattctgat
tctcataaggactcgtctatacccacttcagagagtcggcatcctgaaacaaaggctctt
ctgcgggtccaggatttagataagaaatatgttagcagacataacgtccatggtgttgag
atggaggtgtcactaacttctgctgtcttccttcatccagagaccgcttcaaggtattcg
ttcaactctcttcagcttttgttgatggtacgcagacctctgtccaaagagaacaaaagt
aacgatggaaaggataacctgagaatgagaggtagtagaatggaaaaagaagccaacaat
gggaattcaatagataaacaggagcacagtcaagcagttgtccgactattaatatcagaa
tcagtggccaaaggacatgtaatgctttctcagcctcttcgtttttatttgagagcaggc
ttacactcatgggtatatgtgaagacatggagtggtagtctgaagcaagatattcctttc
ataaagctttcaccttgccagttagaaaagcttcacgaggatgaagcttttgaaaatgat
ggtactgatgttttggttggtcagaaaaatttcaaagccaagcaaatgcttttcaggaca
aattccggtgcagagatgggtatgattgattggtcaatccatgagaggattattgctgct
ctttttaataaatctcctggggacgaggaccaaaaagatggcactgagtcaggcattaag
aagggtttattaacttttttgcaggcatggtgtcaagctcaatgtgatgcaattatttca
aattcgggtcttcaagttagttcattgatgctaggtagtaaaactttagttcactttaca
gtagaaggaaaattttttgaccatcctggaaagttacaaggaccaaaagatggtcttttt
aaacgacaacataaagctggtgaacgatctgctgacatcctattcatcctttccattact
gatgagtctatgcatgccaaaaagatggatgcgtatgaaatatcttttgatcaccgcaag
gaaaatggcgaagacaaaagcttagaaagtttgcttccaaaattgcatttgagcgatggt
gtatgcatatatgctgttaatgagcaagtctctgacaagaactctggtttggcaatatct
tcactgaactggatgggtacagctgcatctgatgtaataaacaggttaacagctttactg
tctcgaaattctgtgcttatgttgagtaactatgatcttcctttgcctgggcatgttctg
atttatggacctccaggttctggaaaaacattactagccacagtggctgcaaaatctgtt
caagataatgtagaaattctggctcatgttgtcaatgtatgttgttcaagactgacttca
gaaaagcactccaatattcggcaagcactttcaggctacatatctgaagctctggatcat
gcaccttctgttgttatatttgatgatcttgacagcctcatttcatcttcgtctaatcca
gaagtgcagcaacaatcattatattcagtggggctcacacaatttcttcttgatattatg
gatgaatatgaggaaaagcagggaaggatgtgtggaattggccctattgcttttatagct
actgctcaatcattgactaatgtaccacagacattgagctcttctggaagattcgactgt
catgttaagttgccagcacctgctgctgcagaacgtgcagcattgttgaagcatgaattc
cagaagcgccacttggaatgtcatgatgatgtcatttcagacatagcatccaagtgtgat
ggatatgatgcatatgatatagaaatacttgttgataggtctgtacatactgctgtgggt
cgcttcctgtccagtgatttgggttctaaggagcaagtcaagcccactttagttagggat
gatttcttgcatgccatgcatgaattccttccagttgccatgcgtgaccttactaagcct
ccttctgaaggtcgtcattctggttgggaggatattggtggccttgatgacatccggaat
tccataaaagagatgattgagttgccttctgagttcccaaacatctttgctcaagctcct
ttaaggatgcgcaccaatgttctcctatatggcccccctggttgtggaaagacacacatt
gttggtgctgctgctgcagcttgttcattacggtttatctcagttaaagggcctgagttg
cttaacaaatacattggggcttctgagcaagctgttcgagatatattctctaaagcagct
gcagcagcaccgtgccttctcttttttgatgaatttgattcgattgccccaaagagaggg
catgataatacaggtgtgactgatcgagtagttaatcaatttctgacagaattagatggt
gtggaagtcttgactggtgtatttgtctttgctgccacaagtaggccagatttgcttgat
gctgcacttctccgtcctggaaggctggaccgccttcttttctgtgattttccttcagaa
catgagaggttggacattcttagagtgctttcaagaaagctaccgttggctggtgacgtg
gacttgggctttgtagctcgcatgactgaagggttcagtggagctgacctccaagcactt
ctttcagatgcacagctagaagcagttcatgaccttttgggtaatgaagatgataagagg
agcaagaagatgccaataatctctgacactcttttgaaatccattgcctccaaggcaaag
ccatcagtttcagaatccgagaagcgcaggttgtatgacatatacagacaatttttggat
tcaaagagatctattgctgcacagtcaagagatgccaagggcaaaagagcaaccctggca
tag
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