Coffea arabica (coffee): 113713577
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Entry
113713577 CDS
T11342
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113713577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113713577
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
113713577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
WHD_UBR1
Tau95
DUF7863
Motif
Other DBs
NCBI-GeneID:
113713577
NCBI-ProteinID:
XP_071925605
UniProt:
A0ABM4W1E6
LinkDB
All DBs
Position
10c:3200699..3204468
Genome browser
AA seq
266 aa
AA seq
DB search
MEDDGNGSNSTVVDTAKAERSVWLMKCPLVVSKSWQAQAAASSSSSVSDSPPASKVVVSL
DPLRPDDSLQFTMEMAGTGSDTGNMPKSYSLNMFKDFVPMCIFSETNQGRVAAEGKVEHK
FDLKPHNENMEEYRKMCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMVGLIASNSKDKK
KAAPVKGSDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVY
NKRGTNQGTYELKPEYKKSVEDTGAE
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggtaacggcagcaacagcaccgtcgtggacaccgccaaggcggagaga
tcggtgtggctgatgaagtgtccactagtcgtttccaagtcctggcaagctcaagctgcc
gcctcttcttcctcttccgtctccgattcacctccggcctctaaagtcgtcgtctctctc
gatcctcttcgtcccgacgactcactgcagtttactatggagatggctggaactggaagt
gacaccggaaacatgccgaaaagctactcgcttaatatgttcaaagactttgttcctatg
tgtattttctctgagacaaatcaaggaagagttgctgcagaagggaaagtcgaacataaa
tttgacctgaaaccacacaatgaaaacatggaagagtatagaaaaatgtgtcgtgagagg
acaaataaatcgatggtcaaaaatagacaaattcaagtgatcgacaatgatcgtggtgtg
cacatgaggcctatgcctggaatggtaggcttgattgcatccaattctaaggataagaag
aaagcagctccagttaagggatcagatgtcaagagaactagacgggatcgtggagaacta
gaagatatcatgtttaaactttttgaaagacaacctaattgggccttgaagcagcttgtg
caagagactgatcaacctgcgcaatttctgaaggagatactgaatgagctctgcgtctac
aataaaaggggtacaaaccaaggaacatatgagctgaagccagagtataaaaagtctgtt
gaggatacaggtgctgagtaa
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