Coffea arabica (coffee): 113713622
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Entry
113713622 CDS
T11342
Name
(RefSeq) CSC1-like protein RXW8 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
113713622
Transporters [BR:
carb02000
]
Other transporters
Pores ion channels [TC:
1
]
113713622
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
113713622
NCBI-ProteinID:
XP_027093184
UniProt:
A0A6P6URK2
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Position
10c:8296049..8306200
Genome browser
AA seq
745 aa
AA seq
DB search
MYLAALLTSAGINIAVCVVIFSLYSILRKQPRFMNVYFGQKLAHAKSRRQDPFCFERLVP
SASWIVKAWEASEDQICAAGGLDALVFIRLIVFSIRIFSIAATICISLVLPLNYYGHDME
HKVIPSESLEVFSIANVQKGSKRLWAPCLALYVISCCTCALLYHEYKSITKLRLLHITEA
LSNPSHFTVLVRGIPSSQTESYSETVAKFFSTYYASSYLSHKMVYQSGTVQKLMSDAGKM
YKMLKTCTREQQCGPNLMRCGLCGGTTSSFKMLAIESQNDKGRSDSDAADLRRKECGAAF
VFFRTRYAALVAAQSLQSQNPMKWVTERAPDPKDVYWTNLGLPYRILWIRRIAIFVVSIL
FVAFFLVPVTLTQSLVNLDKLQNTFPFLKGILKRKFMSQLATGYLPSVILMLFLYMAPPL
MLFFSTMEGAVSRSGRKLSACIKLLYFMIWNVFFANILTGTIIKNLVGEVARRLQDPKNI
PNELATAIPTTATFFMTYILTSGWASLSFEILQPLALICNLFYRYALRNKDESTYGTWTF
PYHTEIPRVILFGVMGFTCSIMAPLILPFLLVYFFLAYLVYRNQILNVYVTKYQTGGLYW
PTVHNATIFSLVLTQIIASGVFGIKKSTVASSFTFPLIILTLLFNEYCRQRFLPVFKRNA
AKVLIEMDWQDEQSGIMEETHQKLQSAYCQLTLTTLHQDATLHEHPGETVASGLQDLENL
DSGKTQTSGLWAGHSSPEIKELHAM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtacttagctgctctattgacttctgctggaattaatatagcagtttgcgtggtgatt
ttctcactgtattctattctaagaaaacaaccgcggtttatgaatgtctactttggtcaa
aagctcgctcatgcaaaatcaagacgccaagatccattttgttttgaaaggctagttcct
tccgctagttggatagtgaaagcctgggaagcatctgaagatcaaatttgtgctgctgga
ggattagatgctctagtattcatccggttgattgttttcagtatcaggatattctccata
gctgctaccatatgcatctctcttgtgcttccacttaactattatggacacgacatggag
cacaaagtcattccatcggagtcgcttgaagtcttttccattgcaaatgttcagaaagga
tcaaaaaggctttgggccccctgtcttgcactatatgtcatttcttgctgcacttgtgct
cttctttaccatgagtataaaagcatcacaaagttgaggctcttacacattactgaagct
ctttctaacccgagtcacttcacagttcttgttcgtggcattccgtcgtctcaaactgaa
tcatatagtgagacagtggccaaattttttagcacatactatgcctcaagttatttatcg
cataaaatggtttatcaatctggtacagttcagaaactgatgagtgatgcagggaagatg
tacaagatgctcaagacttgtaccagagaacaacaatgtggcccaaatttgatgagatgt
ggtctttgtggagggactacatcatcttttaagatgcttgccatagagtctcaaaatgac
aaggggagaagtgactctgatgcagcagatttgagaagaaaggaatgtggtgctgcattt
gttttcttcaggacccgctatgctgccttggttgccgcacaatctcttcaatcacaaaat
cccatgaaatgggtgactgagagggctccagatccaaaagatgtctattggacgaacctt
ggtctgccttatagaatcctttggattcgacgaatagctatttttgtggtctccattctt
tttgttgcatttttcctcgtgcctgttacactaacacaaagccttgtgaaccttgataag
ctgcagaatacatttccatttctgaaaggaattttaaagaggaagtttatgagccagctt
gctactggatatttaccaagtgtcatattgatgttatttctgtacatggctccaccactt
atgctttttttctctaccatggagggtgctgtctctcgcagtggcaggaaattgagtgct
tgcatcaagcttctgtacttcatgatatggaatgttttctttgcaaacattttaacggga
accattattaagaatttggtcggcgaagttgctcggagattgcaagatccaaaaaatatt
ccaaacgagcttgccactgccatcccaacaacggctacctttttcatgacttacattttg
acatccggttgggcaagtttgtcatttgagattctacaaccattggccctgatatgcaac
cttttctacagatatgctctcagaaacaaagacgaatcaacctatgggacctggactttt
ccttaccacacagaaattccaagagttatcctttttggagttatgggcttcacctgttcc
ataatggcacctttgatcttaccatttttgctagtctacttcttccttgcttaccttgtg
tatcgcaatcagattcttaacgtgtatgtcactaaatatcaaactggaggactctattgg
ccaactgtgcacaatgctacaatattctcattggtgctgacgcaaataatagcttccgga
gtctttggaattaaaaaatccactgttgcatccagcttcacctttccgctgatcatcctt
acactactgttcaatgaatattgccggcaaaggttcctcccggtatttaagaggaatgct
gcaaaggttctcattgagatggattggcaagatgagcagagtggaataatggaagagact
catcagaaactgcaatcagcatattgtcaattgacattgactactcttcaccaggatgca
accttgcacgagcatcccggcgaaacagttgctagcgggttgcaagacctagaaaactta
gattcaggaaagactcagacatctggattatgggctgggcattcctcaccagaaatcaaa
gagcttcatgcgatgtag
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