Coffea arabica (coffee): 113713656
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Entry
113713656 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113713656
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113713656
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113713656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
Rtf2
Zn_ribbon_6
zf-ANAPC11
zf-Nse
zf-RING_10
Prok-RING_4
zf-RING_4
Sina_RING
zf-RING_Vps41
zf-RING_6
TRAF3_RING
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
113713656
NCBI-ProteinID:
XP_027093240
UniProt:
A0A6P6UQY8
LinkDB
All DBs
Position
1e:complement(51563621..51568248)
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AA seq
219 aa
AA seq
DB search
MSTQGHRTYSRSQRRRKTGLNVDLNAVPPSDNRDQVGPSARSQSQDYETSWGAGPIPPCP
IDLEAIDDDVMISSPRAFAEAKNNSRRNHGRVIVVDVDSDERSSRGTQNGRNKHRRVSAN
QTFINCDLYINLEGASNSGRDNVNSVVSQPLPPPPPPKEPTFNCPVCMGPLVEEMSTKCG
HIFCKACIKSAIAAQNKCPTCRRKVTTKDIIRVYLPAAS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccagggacataggacatattcaaggtctcaacgaaggcggaaaacaggatta
aatgttgatctaaatgcagtgccaccaagtgataaccgtgaccaagtgggaccttcagct
cgttctcagtctcaagactatgaaactagctggggagctggtcctatcccaccttgccca
attgatcttgaggcaattgatgatgatgtgatgatatcctcgcctagggcgtttgcagag
gctaaaaacaattctaggaggaatcatgggcgggtgatcgtcgttgatgtagactctgac
gaacgatcatctagagggactcaaaatggtcgaaacaagcacagaagagtctctgcaaac
caaacatttataaactgcgacctttacattaacctggaaggtgcaagcaactctgggaga
gataatgtgaattctgtggtgtcgcagccactgccaccaccgcccccaccaaaggagcct
accttcaattgtccagtttgcatgggtccattggttgaggaaatgtcaaccaagtgtggt
cacattttctgtaaggcatgcatcaagtctgccatagctgctcagaataaatgccctaca
tgtaggcggaaagtcacaacgaaagacattatcagggtctatcttcctgctgcaagttaa
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