Coffea arabica (coffee): 113714128
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Entry
113714128 CDS
T11342
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113714128
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113714128
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF7016
Motif
Other DBs
NCBI-GeneID:
113714128
NCBI-ProteinID:
XP_071937665
UniProt:
A0ABM4X0V6
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Position
1c
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AA seq
441 aa
AA seq
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MSVSIKCFSLCSLLTIMLVSLNAGAERDSYVKDGEVLQSTGNSTIPLRPNEEAEFKHEHA
VDDPEMVASMVDTSIRNNTERRKLGFFSCGTGNPIDDCWRCDPNWQRQRKRLADCAIGFG
RNAIGGRDGRFYIVTDPGDDDPVNPQPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNS
FKTIDGRGVNVHIANGACITIQFITNVIIHGLHIHDCKQTGNAMVRSSPSHYGWRTMADG
DGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDDYVRD
KSMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSAEPTINSQGNRYLA
PANPFAKEVTKRVLTNEGVWQHWNWRSDGDLMLNGAYFTSSGLGASAGYARASSLAAKSS
SLVGSLTSGAGVLSCRRGHQC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtctctattaaatgtttcagtctttgttcattgttaaccataatgctcgtatct
ctcaatgcgggtgcagaaagagacagttacgttaaggacggcgaggtgttgcagagcaca
ggaaactcaacaatcccattaaggccaaatgaagaggctgaattcaagcacgagcacgct
gtcgacgatccagaaatggtcgcttccatggttgatacgagcatacgcaataacacagag
aggaggaaattgggattcttctcatgcgggacaggaaatcctattgatgattgctggcgc
tgtgacccaaactggcaacgccaacgcaaacgcctggccgattgtgccattggatttggg
cgcaatgccattggcggtcgtgatggcaggttctatatagtcacggaccctggtgatgat
gaccctgttaacccccagcctggaacacttcgtcatgccgtaattcaggacaggcctctc
tggattgtgttcaaacgggacatggtgatcaccctaaagcaagagcttattatgaacagc
tttaagacaattgatggccggggtgttaatgttcacattgcaaacggggcttgcataacc
atccaattcatcaccaatgtcatcattcacggcctccacatacatgactgcaaacaaacc
ggtaatgccatggttcgaagctctccaagtcactatggctggaggacaatggctgatggt
gatggcatttccatatttggttcgagccacatttggattgatcataattctctttccaac
tgtgctgatggcctcattgatgccatcatgggctctactgcaattaccatctctaataac
tacttcactcaccataatgaggttatgttattgggccacagcgacgactacgtcagggat
aagagtatgcaggtcaccattgcctacaaccattttggggaggggctgatacagaggatg
ccaaggtgcaggcatggatatttccatgtggtaaacaatgactacactcattggaagatg
tatgcgattggtggcagtgctgagccaaccattaacagccaggggaacagatatctggcc
cctgccaacccttttgcgaaagaggtgacaaagagagtgttgacaaatgaaggggtttgg
cagcactggaactggaggtctgatggggacctaatgctgaacggagcctacttcacttca
tctggccttggagcttcggccggctatgccagagcctccagcttagcagccaagtcctct
tcattagtgggatcccttacctctggtgcgggggtcctttcttgccgcagagggcaccag
tgctaa
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