Coffea arabica (coffee): 113714170
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Entry
113714170 CDS
T11342
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
carb Coffea arabica (coffee)
Pathway
carb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
113714170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
carb04040
]
113714170
Ion channels [BR:
carb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113714170
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
113714170
NCBI-ProteinID:
XP_027093765
UniProt:
A0A6P6USK0
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Position
10c:49302761..49307845
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AA seq
665 aa
AA seq
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MNKIKDQILDPSSDIVNWWNHVFLVTCLISLFIDPLYFYLPYVGEMACMTTENEASVSIT
YCRTLADLFYLLHILFKFRTAFVAPSSRVFGRGELVMDARQIAMRYLKSDFIVDFAATLP
LPQIVIWYVIPATKSKKSGQADNTLALIVLFQYIPRLFVIFPLNQKIIKTTGFIAKTAWA
GAAYNLLLYMLASHVLGASWYLASIGRQLSCWKTECRAEMDAFPPCSLKFLDCDSVGQIE
RNYWLNATKLVTRCDAKNDDSDFKFGMFAHAFTSAVASSRFSHKYLYCLWWGLRNLSSYG
QNLQTSTYIGETVFCIVLCIGGLILFARLIGNMQTYLQSMTVRLEEWRLKKRDTEEWMRH
RQLPPELQERVRRFVQYKWFATRGVNEESILLSLPLDLRREIQRHLCLNLVRRVPFFAQM
DDQLLDAICERLVSSLSTEGTYVFREGDPVDEMLFVIRGQLESSTTNGGRSGFFNSITLR
PGDFCGEELLTWALVPNSSLNLPSSTRTVRTLTEVEAFALRAEDLKFVAIQFKRLHSKKL
QHAFRYYSPQWRTWGACFIEAAWRRYKRKRLAKELAVQESLYTDWDGDFTYQQKSADGLY
NGSEEVPLVDIDNNGQHLGATILASKFAANTKRGVVQKVQVADASSSSLKMPKLFKPDEP
DFSLV
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaattaaagaccaaattctggaccccagcagcgacattgtcaactggtggaac
catgttttcctcgtaacttgcctcatctctctcttcatcgatccgctctatttctacctc
ccctacgtcggtgaaatggcttgcatgaccaccgaaaacgaagcctccgtcagcatcacc
tactgccgcaccctcgccgacctcttctacctccttcacattctcttcaagttccgcact
gccttcgttgcccctagctccagggtcttcggccggggcgagctcgttatggacgccaga
caaattgccatgcgatatctcaaatctgatttcattgttgattttgccgctactctcccc
ttaccccagattgtcatctggtatgtaattccggcgaccaaaagtaaaaaatctggtcaa
gccgacaacactcttgcccttattgttcttttccagtatattcccagactgttcgtcatc
tttcctttgaatcagaagattatcaaaactactgggtttattgctaagactgcttgggct
ggagctgcatacaatctccttctctacatgttagccagtcatgtgctaggagcttcatgg
tatctagcgtcaatagggcgacagctctcttgttggaagacagagtgtagagcagagatg
gatgcatttccaccttgcagcttgaaatttctggattgtgatagtgttggacaaattgag
aggaactattggctgaatgcaacgaaacttgtcacccgctgcgatgccaaaaatgatgat
tcagatttcaaatttgggatgtttgcacatgcttttaccagcgcagttgcttcatcaaga
tttagtcacaagtatctctattgtctttggtggggtttgagaaatttgagttcgtatggg
caaaacctgcagactagcacttacattggagagacagtattttgcattgtcttatgtatt
ggtggtttgattctgtttgcaagattgattgggaacatgcagacttatttgcaatctatg
acggttagacttgaagaatggagacttaagaaaagggatacagaagagtggatgagacat
cgccagttacctccagaattgcaagaacgggttcgtcgttttgttcagtataaatggttt
gctacaaggggcgttaatgaggaatccatcctcctttccttgcctttggatcttcgtcgt
gaaattcagcggcatctatgtctaaacctagttcgaagagttccttttttcgcacaaatg
gatgatcaactgcttgatgccatatgcgaacgcctggtctcgtccttgagcaccgaagga
acctatgttttcagagaaggagatccagtggatgagatgctttttgtcattaggggacag
ttggagagttccacaacaaatggtggaagatccggatttttcaattcgatcaccctcaga
cctggagacttctgtggggaggagttactgacatgggccttggttcccaactcaagtcta
aacctgccttcttcaactcgaactgttcggacacttactgaagttgaggcattcgcactt
cgtgccgaagacctcaagtttgttgcaatccagtttaaacgtctccatagcaagaagctc
cagcatgcattcaggtactactctcctcagtggaggacatggggtgcttgctttatagaa
gctgcatggagaaggtataaaagaaagagacttgctaaagagttggccgtgcaagaaagt
ctatatactgactgggatggtgacttcacgtatcagcaaaaatctgctgacggattgtat
aatggatctgaagaggttccactggtggatattgataataatggtcagcatcttggagct
acaatcttggcttcaaaatttgctgcaaacaccaaaagaggggtcgtccagaaggttcag
gtggctgatgcctcctcttctagcctaaagatgcccaagttgtttaagccagatgaacct
gatttctctctagtctaa
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