Coffea arabica (coffee): 113714317
Help
Entry
113714317 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113714317
04121 Ubiquitin system [BR:
carb04121
]
113714317
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113714317
Membrane trafficking [BR:
carb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113714317
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113714317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_16
zf-RING_5
DUF7129
FAR1_N
zf-C3HC4_3
2-thiour_desulf
Motif
Other DBs
NCBI-GeneID:
113714317
NCBI-ProteinID:
XP_027093905
UniProt:
A0A6P6USZ9
LinkDB
All DBs
Position
10c:45974013..45977207
Genome browser
AA seq
348 aa
AA seq
DB search
MSLSPPGGTDNGRRNDQLYWCYQCHQGVRVASDNPSDIVCPQCFGQVLVEIDMARPVHDF
TAFDPSPEARWVEVLSIMFHPLLRTRNVRFRERENRFPDGELVNIPRQRDRGSRGWFWQR
RRGGVLRDNENDDWGRESGILARPRTLFIIRPVGPSPTRQDHGEEAGLFPTGIDARNYFL
GPGLEQLIEQLTQNDRPGPPPLPDSVIDSIPTVKLTSSHLINESECPVCKEKFDIGDEAR
ELPCNHIYHSDCIVPWLRLHNSCPVCRHGLPVPSDQSRLAENDQESEAHDSPNGRGTSRS
QRCLRLRQQLASIWPFRSIHRNIHRQNDESSSSQGGAAQSWRHSCYIL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgagtcctccaggtggaacagacaatggtaggagaaacgatcaattatattgg
tgttaccagtgtcatcaaggagtcagggttgcctccgataatccatctgacatcgtctgt
cctcaatgtttcggccaagttcttgttgaaatagacatggccaggcctgttcatgatttc
actgcatttgatccctccccagaagctcgatgggtcgaagtactctcaataatgttccat
cctctacttagaacccgaaatgttagattccgggagagagagaacagattccctgatgga
gaacttgtcaatattccaagacagagagatcgtggcagtcgaggctggttttggcagaga
aggcgtggtggggtattgcgtgataatgagaatgatgattggggacgtgagagtggcatc
ctagcccgacctcgaaccttgtttattatcaggccagtagggccttccccaactcgacag
gatcatggagaagaagctggattattccccacaggaattgatgcaagaaactatttcctc
ggtccaggacttgaacaactgattgaacaactgactcaaaacgatcgccctggccctcca
ccactgcctgactcagtgattgattcgattccaacggtaaaactaacatcatcccatttg
atcaatgagtcagaatgccctgtttgcaaggagaagttcgatattggtgatgaagccaga
gagctgccctgcaaccatatttaccattctgattgcattgtaccttggttaaggcttcat
aattcttgtccagtttgccggcatgggctgcctgtgccgagtgatcagagcagacttgca
gaaaatgatcaagagtctgaggctcatgactctcctaatggaagaggaaccagcaggagc
cagcgatgcctgaggttgaggcagcagttggcttcaatttggcccttccgatcaatacat
cgaaacattcatcgacaaaacgatgaaagtagttcgtcacaaggaggagcagctcagtca
tggcgccactcttgctacattctttag
DBGET
integrated database retrieval system
