Coffea arabica (coffee): 113714322
Help
Entry
113714322 CDS
T11342
Name
(RefSeq) agamous-like MADS-box protein AGL11 isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113714322
Transcription factors [BR:
carb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
113714322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
DUF1192
TSC22
Motif
Other DBs
NCBI-GeneID:
113714322
NCBI-ProteinID:
XP_027093916
UniProt:
A0A6P6UU94
LinkDB
All DBs
Position
10c:11087314..11097536
Genome browser
AA seq
229 aa
AA seq
DB search
MGRGKIEIKRIENNTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYANN
NSIKSTIDRYRKATTDASNSCSTQEINAQFYQQESKKLRQQIQMIQNSNRHLMGEGLSSL
NVKELKQLENRLERGISRIRSKKHEMILAETDTLQKREIQLEQENACLRAKIAENERLQQ
LSIVPPGQEYNEMQAYLARNLLQLNMMEGLPVFQVPDKKSLQLGLDLVG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaaagattgagatcaagaggattgagaacaacactaataggcaggtgacc
ttctgcaagagaagaaatggacttctcaagaaagcctatgaactttcggttctctgtgat
gctgaagttgcactcattgttttctctagtcgcggccgcgtctatgagtatgccaacaac
aacagcataaagagtaccatagaccggtacaggaaggcaaccacagatgcttcaaacagt
tgctccactcaggagatcaatgctcagttctaccagcaagaatccaagaaactgcgccag
caaatacagatgatccagaattccaacaggcatctcatgggagaaggtttaagctccctg
aatgtgaaggagctgaagcagttggagaacaggcttgaacgaggcatctcaagaatcagg
tcaaaaaagcatgaaatgatacttgcagagactgataccctgcaaaagagggaaattcag
ctggaacaggaaaatgcttgtctcagagctaagatagcagaaaatgaaaggcttcagcaa
ctgagcattgtgccacctgggcaagaatacaacgaaatgcaggcttatctggctaggaat
ttgcttcaactcaacatgatggagggtctgcctgtttttcaagtccctgacaagaaatct
cttcaactcgggttggatctagtaggttaa
DBGET
integrated database retrieval system
