Coffea arabica (coffee): 113714324
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Entry
113714324 CDS
T11342
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
carb Coffea arabica (coffee)
Pathway
carb04145
Phagosome
carb04517
IgSF CAM signaling
carb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113714324
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113714324
09142 Cell motility
04814 Motor proteins
113714324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113714324
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113714324
04147 Exosome [BR:
carb04147
]
113714324
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
113714324
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
113714324
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113714324
Exosomal proteins of colorectal cancer cells
113714324
Exosomal proteins of bladder cancer cells
113714324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Misat_Tub_SegII
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
113714324
NCBI-ProteinID:
XP_027093921
UniProt:
A0A6P6UU97
LinkDB
All DBs
Position
10c:2693421..2696748
Genome browser
AA seq
448 aa
AA seq
DB search
MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYRGDGSNDLQLERINVYFNEASGGR
YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD
VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKN
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP
TGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
VAEYQQYQDATAEDEEEYDDGADEAYEN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcttgcacattcaaggaggtcaatgcgggaatcaaattggttccaaattc
tgggaagtaatctgcgacgaacacggggttgatccaaccggccgttacaggggagatggc
tccaatgatcttcaactggaacgcatcaatgtctatttcaatgaggcttccggtggccgt
tatgttcctcgggctgtcctcatggatctcgagcccggcaccatggacagcatcagatcc
ggcccttacggccagatcttcaggcccgacaacttcgtctttggtcagtctggtgccggt
aataactgggctaaaggacattacactgagggtgctgagttgatcgatgccgttctcgac
gtcgtgcgtaaagaagccgaaaattgtgactgcttgcaaggatttcaagtgtgtcactcg
cttggaggaggcactggctctggaatgggaaccctattgatttccaagataagagaagaa
tatccagacagaatgatgctcactttctcagttttcccctcaccaaaggtttctgacact
gttgtagaaccctataatgccaccctctcagtgcatcagttggtggagaatgcagatgaa
tgcatggtccttgacaatgaagcactttatgacatttgtttcaggaccttgaagcttagc
actccaagctttggtgatttgaaccatttgatttcggcaactatgagtggggttacctgc
tgcttgagattcccaggtcagctcaactcagacctgcggaagctggctgtgaacctgatt
cctttccctcgtcttcactttttcatggtgggatttgcgccacttacttcccgtggatcg
cagcaatacatatctctcactgtgccagagctcactcagcaaatgtgggacgccaagaac
atgatgtgtgcagctgatccgcgacatgggcgctacctcactgcatccgcaatgttcaga
gggaagatgagcaccaaagaggtggatgaacagatgatcaatgtgcagaacaagaattca
tcgtactttgtagagtggatcccaaataatgtcaagtcaagtgtttgtgatattcctcct
actgggttaaagatggcatctacttttgtcggaaattctacctcaatccaagagatgttc
aggagagtgagcgagcagttcactgccatgttcaggcgcaaagccttcttgcactggtac
actggagaaggaatggatgaaatggaattcacagaagctgagagcaacatgaatgatttg
gtggcagaatatcagcagtaccaggatgccactgcagaggacgaggaagagtatgacgat
ggtgccgacgaggcgtatgaaaactaa
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