Coffea arabica (coffee): 113714452
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Entry
113714452 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K03243
translation initiation factor 5B
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
113714452
Translation factors [BR:
carb03012
]
Eukaryotic type
Initiation factors
eIF-5
113714452
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
113714452
NCBI-ProteinID:
XP_071925050
UniProt:
A0ABM4VZT0
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All DBs
Position
10c:complement(52202437..52215084)
Genome browser
AA seq
1422 aa
AA seq
DB search
MGRKKPSARDDEVAGATQGGVGGGKSKKKNLVIDDDEYSVGTELSEESNVQEEKTATVGG
GKKKGKKGNAKKGGLKEDDDDDDQLEERIDDKEHDEALDIQFAGKKKGKAKKGGNNKSNS
VFSSGNFGLLGDEDGETEVSELTQGRDGESGGSEDDGENVIAFTGKKKPTKSKKGGGKSG
FSAAAFDAIGVEDDEAVGGSASGELSDKDDETVIAFSGKKKPSKSGKKGGSGAFTTSPFG
AIGDEDDGGVDDLVSGQQSDNGEPLIEFSGKKKPSKTGKKGGDSLFSTSSFNGLEDGENK
EESKEEDEDIASITFTGKKKKSSKSSKKSSANSFDAAVLDEDTIEEVSMSKSGAEAAGDG
TSALDELDTSVAMFSGKKKSSKKKGSGAISALDAGTGDESLVVAEADQPSVSASSKQIAE
DVAETLKNKKKKKKSGRTAQEEEDLDKILAELGEAPPVSKPSPTPTPGLLEPTAEEKVQS
QLEQDGAGEKEAEEGGPAESAAAKKKKKKKEKENEKKAAAAAPVTEDKQEDSKNETKGKA
SDKKVPKHVREMQERLARLKEAEERKKREEEEKLRKEEEERRRQEELERLAEEKKRLKKE
REKEKLMKKKQEGKLLTGKQKEEARRLEAMRKQILANAGGLPLPTGDAVGVPTKRPKYQT
KKSKPASQANGAAVAEAAESQEIKESEIGSEVDSVETEKFEEVQVLEVEKPQEVEVEEEN
EVEVEEEDDDEEWDAKSWDDADLKLPGKSAFADEEVDSEPENVGKKELKSTRPATNDAGS
RPLASKTATAPLKSVNPEVGVVEKQKQREAPTKTDAAEPVAPPTRGENNLRSPICCIMGH
VDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAGNIRERTKELKADAKLSVPGLLVI
DTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRL
YGWKTCRNAPIMKAMKQQSKDIQVEFNMRLTQVITQFKEQGINTELYYKNKEMGETFSIV
PTSAISGEGIPDLLLLLVQWTQKTMVEKLTYQDEVQCTVLEVKVVEGHGTTIDVVLVNGV
LHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYVHHKKIKAAQGIKITAQGLEHA
IAGTGLYVVGPDDDLEDIKEAAMEDMRTVMNRIDKSGEGVYVQASTLGSLEALLEFLKTP
VVNIPVSGIGIGPVHKKDVMKASVMLEKKKEYATILAFDVRVTPEARELADELGVKIFCA
DIIYHLFDQFKAYIDNLKEEKKKEAADDAVFPCVLKIIPNCVFNKKDPIVLGVDVLEGVA
KVGTPICIPQKDFIDIGRIASIENNHKPVDYAKKGLKVAIKIVGSNPEEQQKMFGRHFEI
EDELVSHISRRSIDILKANYREDLSLEEWKLVAKLKNLFKIP
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaagaagccgagtgctcgtgatgatgaggtggccggggcgacgcagggtggc
gttggtgggggcaagtctaagaagaagaatttagtgattgatgatgatgagtattcagtt
gggacagagttgtctgaggagagtaatgttcaggaagagaagactgctacggttggtggt
ggtaagaagaagggtaagaaggggaatgcaaagaaaggaggattaaaagaagatgacgat
gatgatgaccagctggaggagagaattgatgacaaagagcatgatgaggcactggatata
cagtttgcaggcaaaaagaaagggaaggcgaagaagggtgggaacaataagagcaacagt
gtctttagttctgggaactttggattgttaggggatgaagatggtgaaactgaggtttcg
gaattaactcagggtagagatggtgagagcgggggtagtgaggatgatggggagaatgtg
atcgcctttactggtaagaaaaagccaacaaagtcaaaaaagggtggtggtaaaagtggg
ttcagtgctgcagcatttgatgctattggagttgaggatgatgaagcggttggaggttcg
gcttctggagagctgtctgataaggatgatgagacagtgattgcattttctgggaagaaa
aagccatcaaaatctggtaagaagggtggcagtggtgcatttacgacatcgccttttggt
gcaattggtgatgaggatgatggaggtgttgatgatttagtttctgggcaacagtctgat
aatggggagcctttgattgagttctctgggaagaagaagccatcgaaaacaggtaagaag
ggtggtgatagtttgttttcgacatctagttttaatgggcttgaggatggggaaaacaaa
gaagagagtaaagaggaagatgaggatattgcttctattaccttcacaggaaagaaaaag
aagtcttccaagtcttcaaaaaaaagcagtgctaattcatttgatgctgcagttcttgat
gaagataccattgaagaagtttctatgtccaagtcaggagctgaagcagcaggagatggt
acaagtgctctggatgaattagacacatcagttgctatgttttctggtaagaagaagtca
tctaaaaagaagggtagtggcgcaattagtgcacttgatgctggaactggggatgagtcc
ttggttgtagctgaggctgatcagcctagcgttagtgctagttcaaagcagatagctgaa
gatgttgcagagactttaaaaaataagaagaagaaaaagaagagtggaagaactgcccaa
gaagaggaggatttggacaagattcttgctgaacttggagaagcgcctcctgtatcaaaa
ccttctcccactcctacacctggtcttctggagccaactgctgaggagaaagttcaatct
cagcttgagcaagatggtgcaggtgaaaaagaagctgaagaaggagggcctgcagagtct
gcagcagcaaagaagaagaagaagaagaaggaaaaggagaacgagaaaaaagcagctgca
gctgcacctgtgacagaagacaaacaagaagatagtaaaaatgaaaccaagggtaaagct
tcggacaagaaagttccaaagcatgtgagagagatgcaagagagacttgcaagacttaaa
gaagctgaagaaaggaaaaaaagggaagaagaggagaagttaagaaaagaagaagaggag
cgtcgtaggcaggaagaacttgagaggctagcagaagaaaagaaacgcttgaagaaggag
agggaaaaagagaaactcatgaagaaaaagcaagaagggaagctattaactggtaaacag
aaggaagaagctcgtagattggaggcgatgaggaaacagatactagccaatgctgggggc
ttgccattacctacaggggatgctgttggggtgcctacgaaacggcccaagtaccagaca
aaaaagtcaaagccagcttctcaagcaaatggtgcggctgttgcagaggctgctgaaagc
caagaaataaaagaatcagaaattggatctgaggtcgactctgtggaaacagaaaagttt
gaggaagtgcaagttttggaagtagagaaaccccaagaagttgaagttgaggaggagaat
gaggttgaagtagaagaagaagatgatgatgaagaatgggatgccaaaagttgggatgat
gctgatcttaaactgcctggtaaaagtgcttttgctgatgaagaggttgattccgagcct
gaaaatgtgggtaaaaaggagttaaagagcacaaggcctgctacaaatgatgcagggtct
cgccctttggcgtcaaagactgcaactgcaccactaaaatctgtgaatcctgaggttggg
gttgtcgaaaaacagaagcaacgagaagctcctactaaaacggatgctgcagaaccagtt
gctccccccactcggggtgaaaataatctccgctcgcctatttgctgcattatgggccat
gttgatactggcaaaactaagttacttgactgcattcggggtaccaatgttcaggaaggt
gaagctggaggtattactcaacaaataggtgcaacatatttcccagcagggaatatacgt
gagagaaccaaggaactaaaagctgatgcaaagctgagtgtcccaggtttattggttatt
gacactccaggacatgaatcgttcaccaacttgcgttctcgaggctcaggtttatgtgat
attgctattctcgttgtggatattatgcatgggttggagccacaaactatcgaatcactc
aatcttttgaagatgaggaatacagaatttattgttgccctgaataaggttgacagactc
tatggatggaaaacatgcagaaatgcacctatcatgaaggccatgaagcaacagtcaaaa
gatattcaagttgaattcaacatgaggctcactcaggttattacccagttcaaggagcaa
ggaataaacactgaattgtactataagaacaaagaaatgggggagactttcagcattgtg
cctactagtgcgatcagtggtgaagggatcccagacttgcttttattacttgttcaatgg
actcaaaagacaatggttgagaaattaacttatcaggatgaagtgcagtgtaccgttttg
gaggttaaggttgttgaaggacatgggacaacaattgatgtggtcttagttaatggtgta
ctccatgaaggagatcaaatagttgtttgtggcatgcagggtccaattgtcaccagtatt
cgagcactattgacgccccatccaatgaaagaactccgagtgaagggaacttatgtgcat
cataaaaaaatcaaggctgcccaggggataaagatcactgcacagggtcttgagcatgct
attgctggcactgggctatatgttgttggtcctgatgatgatttagaagatattaaggaa
gcagctatggaggatatgaggacagtgatgaacagaattgataaaagtggtgagggagtt
tatgtacaggcctctacccttggttcattagaagcactactggagtttttgaagactccg
gtggtcaatatacctgtgagtggtataggcattggtcctgtgcataagaaagatgtcatg
aaggcaagcgtgatgctcgagaagaagaaagagtatgccactatcttggcctttgatgtt
agggtgactccagaggctcgagaacttgcagatgagcttggtgtcaagatattctgtgca
gatatcatctatcacctatttgatcagtttaaggcttatattgacaacctcaaggaggag
aagaagaaggaagctgctgatgatgctgtattcccctgtgttcttaagatcataccaaac
tgtgttttcaacaagaaagatcccattgtattgggagtggatgttcttgaaggtgttgca
aaggtcggaaccccaatttgcattcctcagaaggacttcatcgacattggacgaattgcg
tccattgagaacaaccataaacctgttgactatgccaagaaaggcctaaaggtggccatc
aagattgttggcagtaatcctgaggagcaacagaagatgtttggaaggcactttgagatt
gaagatgagcttgtcagccatatctcaaggaggtcaatcgacatactaaaagccaactat
agggaagatctatctcttgaagaatggaagctggttgcgaagcttaaaaatcttttcaag
ataccgtag
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