Coffea arabica (coffee): 113714510
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Entry
113714510 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113714510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113714510
Spliceosome [BR:
carb03041
]
Common components
Common spliceosomal components
SR proteins
113714510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113714510
NCBI-ProteinID:
XP_071925048
UniProt:
A0A6P6UU37
LinkDB
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Position
10c:7691371..7694970
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AA seq
231 aa
AA seq
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MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERMYRDDYKDRDHHRRSRSRSR
GKDREGRRGRDRDYRHRSRSRSGSPDYHKDRGRGRYDDDRRSRSRSYGSASPARRSASPR
RSQSPRRTPPSRGASPDAVKQKDRSPTSKSLSPRGRRADSRSRSPHSDADD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggagatcgggccctccggacatcagagatacctattctctcctcgtc
cttaacatcactttccgtaccaccgccgatgatttgttcccgctcttcgataagtatggc
aaagtcgttgacgtgttcatcccccgcgaccgcaggactggtgattcaagaggatttgct
tttgtgcgatacaagtaccaggatgaagcacagaaggcagttgaaaagcttgatggaaga
gttgttgatggaagggagataatggttcaattcgcaaaatatggtccaaatgctgaacga
atgtacagggatgattacaaggatagggatcatcatagaagaagccgtagtagaagcaga
ggaaaggatcgtgagggtcgtcgtggcagggatagagattatcgtcaccgaagcagaagc
cgcagtgggagccctgattaccacaaagaccgtggaaggggcagatatgatgatgataga
cgcagtcgaagtcggtcttatggaagtgcctcccctgctcggcgcagtgcaagtcctagg
aggagccaatctccccgcagaacccccccttctcgtggtgcaagtcctgatgcagttaaa
cagaaagatcgttcaccaacctcaaaaagtctgtcaccgcgtggtcgacgtgctgattcc
cgaagccgatctccgcactctgatgctgatgattga
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