Coffea arabica (coffee): 113714528
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Entry
113714528 CDS
T11342
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 45-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113714528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113714528
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113714528
Spliceosome [BR:
carb03041
]
Complex A
U2 snRNP components
U2 related factors
113714528
Complex B
113714528
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NCBI-GeneID:
113714528
NCBI-ProteinID:
XP_027094218
UniProt:
A0A6P6UUM4
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Position
10c:11269421..11273871
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AA seq
1160 aa
AA seq
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MDDVKQKSRKEGSEKESLKRSHRDREDRDRDKERNGERSKDRDRDHHRSSSDRKEKKERE
SRHSERERSSDDKYRDRDRDRERHKDRHKEKDREKERTTGRDAERARDKGRDKEDREVDR
EKEEKERERAKERERERAKEREREREERERERERDRERERERERRERDREREKDRKERER
EKERERIREKEKRREADRDYSSDENGVRDRDRKRRRRDDDHKDRDREQSSKSSKHRDEVE
VSSPQKMEEEDFVDKKENTREEDLAEEQRKLDEEMEKRRRRVQEWQELRRKREESEREVL
GVAANVEEPKSGKAWTLEGESDDEEAPSERKEDADMSVDGGGKTMDGDGGSMAVDSENEH
VISAAENGVGGSMDDEEIDPLDAFMNSMVLPEVERLHSEPPASEDMDTGLKEKNGRGNGE
QPNKGVNKSMGRIISGEDSDSDYGDIENEEDPLEDEDDAEFMKRVKKTKAEKLGVVDHSK
INYASFRKNFYIEVKEVAKMTSEEVATYRKELELKIHGKDVPKPVKTWHQTGLGNKILET
IKKLNYETPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLNSGDGP
IGLVLAPTRELVQQIHSDIKKFSKGLGLSCVPVYGGSGVAQQISQLKRGAEIVVCTPGRM
IDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITKIVQNTRPDRQTVLFSATFPRQ
VEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPESDRFLRLLEILGEWYEKGKILIFV
HSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTIADFKSNVCNLLIATSIAARGLDVK
ELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEDEARYAPDLVKALELSEQVVP
DDLKALADGFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFDEDKSD
SDDEEGVRKAGGDISQQAVLAQAAALAAATKTSVPTPIPTSQIGGLPVSLPSILANIPSV
TSVVPGSGPNDGAARAAALAAAMNLKHTFAKIQADAMPEHYEAELEINDFPQNARWKVTH
KETLSPISEWTGAAITTRGQFFPPGKTAGPGERKLFLFIEGPTEQSVKRAKAELKHVLEE
ITMQASSLPGSAQPGKYSVV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgttaagcagaaatcaaggaaggaaggttcagagaaggagtcactgaagagg
agtcaccgtgacagagaggatagggaccgtgacaaagagaggaatggggagaggtccaag
gacagggacagggaccaccaccgttcatcttctgatagaaaggaaaaaaaggagcgggag
agccgtcactctgagagggagaggagtagtgatgacaaatatagggatagggatagggac
agggagagacacaaggatcggcacaaagagaaggacagggaaaaggagaggactactggt
cgggatgctgaaagagctagagacaagggtagagacaaggaagacagagaagttgacagg
gagaaggaagaaaaggagcgagagagagcaaaggaaagggagcgagagagggcaaaggag
agggagagagagcgtgaagaaagagagagggagagagaaagagatagggagagggagagg
gagagggagagaagggagagggatcgagaaagagagaaggataggaaggagagagagagg
gagaaggagagggagagaatcagagaaaaggagaagcgtcgtgaagcagatagggattat
agtagtgatgaaaatggtgtcagggaccgtgacagaaagaggcggagaagagatgatgac
cataaagacagggatcgtgaacagagtagcaaaagcagcaagcaccgggatgaggttgaa
gttagtagtccccagaaaatggaggaggaagactttgtggataagaaagagaacacacga
gaagaagatcttgctgaagaacagaggaaattggatgaggagatggaaaagcggaggagg
agagttcaggaatggcaagaattaagaagaaaaagggaggaatctgagagagaagtactg
ggagttgcagctaatgtagaagaacccaagtctggcaaggcttggaccctggaaggggaa
tctgatgatgaagaagctccatctgagagaaaagaagatgctgatatgagtgtggatgga
ggtggcaagaccatggatggggatggaggtagcatggctgttgattctgagaatgagcat
gtcatatctgcagctgagaatggtgttggaggtagcatggatgatgaagagattgatccc
ttggatgcttttatgaactctatggtcttgcctgaagttgagaggcttcattctgagcct
cctgcatctgaagacatggatactggtttgaaggagaaaaatggcagaggcaacggagaa
cagcctaacaaaggtgtgaataagtctatgggaaggatcatttcaggcgaagactctgat
tcagattacggcgatattgaaaatgaggaggatcccctggaggatgaagatgatgcagaa
ttcatgaaaagggtaaagaaaactaaagcagagaaacttggagttgttgatcattctaaa
attaactatgcttcatttcgaaagaacttctatattgaggtgaaggaggttgcaaaaatg
acttctgaggaagtagctacttacaggaaagagctggaattgaagatacacggaaaggat
gttcccaagcctgttaaaacctggcatcagactgggttaggaaataaaatcttggaaaca
ataaaaaagctgaactatgaaacgcccatgcctattcaggctcaagcactgcccatcatt
atgagtggcagagactgcatcggcatagcgaagacaggatctggcaaaactttagcattt
gtgctgccaatgttgaggcatattaaggatcagcctccactgaattcaggagatgggccc
attggactcgtattggcaccaaccagagagcttgtccaacaaattcatagtgacatcaag
aagttttctaagggattggggctcagttgtgtacctgtttatggtggttctggtgttgcc
caacagattagccaattgaaacgaggggcagagattgttgtttgcactccaggtaggatg
attgacattctttgtacaagtgccggtaaaataacgaatctgcgtcgggtcacttatttg
gtcatggatgaagctgacaggatgtttgatatgggctttgaacctcaaattacaaagatc
gtccaaaatacacgaccagatcgccaaacagtacttttttctgctacttttccccgccaa
gtggaaatactggctcgtaaagtattgaacaaacctgttgaaatccaggtcggtgggaga
agtgttgtcaacaaagatatagctcaactggtggaggtgagacctgaaagtgataggttc
cttcgacttctagaaattctaggtgaatggtatgagaaaggaaagattttgatttttgtc
cactcacaggagaaatgtgatgcattgtttagagacttgctcaagcatggttacccttgc
ttatctcttcatggggccaaggatcaaacagatcgtgaatccaccatagcagatttcaag
agtaatgtatgcaacttgttgattgcaacaagtattgctgctaggggtttagatgtaaag
gagcttgaactggtgattaattttgatgttccaaaccattatgaggactatgttcatcgt
gttgggcgaactggtcgagctggtcgaaaaggctgtgctattacatttatatcagaagac
gaagcaagatatgcaccagatcttgtcaaagctttggaactttctgagcaagttgtacct
gatgatttgaaagctcttgctgatggtttcatggcaaaggtgaatcagggacttgagcaa
gcccatggaacaggttatgggggtagtggatttaagtttaatgaagaggaagatgaagtc
aggaaagctgccaagaaagcacaggcaaaagaatatgggtttgacgaagataaatctgat
tcagatgatgaagaaggtgttcgaaaggcaggtggtgacatttctcagcaagctgtcctt
gcccaagctgctgcccttgctgctgcgactaagacaagtgtgccaacaccgatcccaact
tcccagattggtggattacctgtttctcttcctagcatcctcgcaaacattccatctgtt
acttcagtagtccctgggagtgggcccaatgatggtgcagccagggccgcagcattggct
gctgctatgaacttgaagcatacctttgcgaagattcaagctgatgccatgcctgaacat
tatgaagctgagctggagataaatgacttcccccaaaatgctcgttggaaggtgacacac
aaggaaactttgtccccaatttctgaatggactggagctgccatcacaactagggggcaa
ttcttcccgcctggcaagacagcaggtccaggcgaaaggaaactgtttcttttcattgaa
ggccctactgagcaatctgtcaaaagggcaaaagctgaactgaaacatgtcttggaggag
atcacaatgcaagcatcttcccttcctggttcagcccaaccaggaaaatactcggttgtc
tga
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