Coffea arabica (coffee): 113714638
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Entry
113714638 CDS
T11342
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
carb Coffea arabica (coffee)
Pathway
carb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113714638
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
113714638
NCBI-ProteinID:
XP_027094405
UniProt:
A0A6P6UUM6
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Position
10c:complement(16140656..16145525)
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AA seq
582 aa
AA seq
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MLPTFDPRDTEAGSRILEDITSNAGHIQEQVLEEILTKNASTDYLKSFLNGHSDKGLFKN
KVPVVDYEDIKIYIDRIALDGEPSRILTNESITELLISSGTSGGKHKWIPKTAEEGERRA
FFFCLLATVQNRYLHGLNDGKALIFDLINPDIHTPGGLVLRTATASEIKNRKDRYPEVIL
CEDTNQSLYSQLLCGLVQRDAIVSIGTIFASGLQRIIKFFEEHWQEMSSNIRTGQMSDWI
TDPKCKRTVSLILSKQMPDLADSIDLVCQEKSWEGIIKKIWPRTKYVQAIITGSMAQYIP
ALEFYTGRLPVVSPAYVSSEACFGINFKPLCNPYDVSYTFIPNMAYYEFIPIGNHQDPNC
TNSKDAHLKDHIVDLANVKIGQHYELLVTTCTGLYRYRMGDILLVTGFHNITPQFKFVQR
RNVVLSIDTDKTTEQDLQNAVTIAMHILEPLGFFLLDYSSYADTSSIPGHYVLFWELQLR
SNDDIPELDQVKMEKCCSLVEQSLDLEYKMLRNQSISTIGPLEIRVVKQGTFNVLMDFYV
SRGTSLNQYKTPKNIKSEKAIEILDSRVVGKFYSREVPNQDS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaacctttgatccaagagatactgaagctggttcgaggattttggaggatata
accagcaatgctggtcatatacaagaacaggtcctggaggagattttaactaaaaatgca
agcaccgattacttgaaaagttttcttaatggtcactctgataagggactattcaagaat
aaagttcctgtggtagattatgaagatatcaagatttacattgatcgaattgcactggat
ggagagccatctcggattttaactaatgaatccattactgagctactgatcagctcgggc
acttcaggtgggaagcacaagtggattccaaaaactgctgaagagggagagcgcagggcc
ttcttcttttgtctccttgctactgttcagaataggtacctccacggcttaaacgatggg
aaagcgctgatctttgaccttatcaacccggatatccacactcctggtggcttagtttta
agaacagctacagcaagcgagataaagaacagaaaagacagatatcctgaggttatattg
tgtgaagataccaatcagagcttgtatagtcaattactttgtggccttgtgcagcgagat
gcgatagtaagcattggtacaattttcgcctcgggtttgcaaaggataatcaaatttttt
gaggaacattggcaagaaatgtcttccaacataagaactggacaaatgagtgattggatc
actgaccctaaatgcaaaaggactgtctccttgattttgagcaaacaaatgccagatttg
gctgattcaattgatcttgtatgccaagaaaaatcttgggaaggaataattaagaagatc
tggccaaggaccaagtatgtccaggccataattactgggtccatggcacagtacattccc
gcgcttgaattctatacaggaaggttacctgtagtttcgccagcctatgtttcttcagag
gcatgttttgggataaattttaaaccattatgcaatccttatgatgtctcatatactttt
ataccaaacatggcttactatgagttcataccaattggtaatcatcaagatccaaactgc
accaatagcaaggatgctcacttgaaagatcacattgtggatcttgctaatgttaagatt
ggccaacattacgaacttcttgtcacgacctgtacaggtttatacaggtacagaatgggg
gatattctcctggtgacaggttttcacaatatcactccccaattcaaatttgtacaaagg
agaaatgtggttttgagcattgacacagataaaacaactgaacaagacctccagaatgca
gttacaattgcaatgcatatccttgaaccacttgggttctttcttttggattacagtagc
tatgctgatacatcctctattcctggtcactatgtactcttttgggagcttcaactcaga
tcaaacgatgatatacctgaacttgatcaggttaaaatggaaaaatgctgtagtttagtg
gaacaatctctggacctggaatataagatgctgaggaatcagagcatcagtaccatcggt
cctttggaaattagagttgtgaaacaaggaacattcaacgtgctcatggacttttatgtt
tctcgaggaacttctttaaaccagtacaagacacctaagaacataaagtctgagaaagcc
attgaaattctggactccagagtagtgggaaaattttacagcagagaagtacctaatcaa
gactcgtag
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