Coffea arabica (coffee): 113714794
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Entry
113714794 CDS
T11342
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
carb03015
mRNA surveillance pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113714794
09122 Translation
03013 Nucleocytoplasmic transport
113714794
03015 mRNA surveillance pathway
113714794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113714794
03041 Spliceosome [BR:
carb03041
]
113714794
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
113714794
Spliceosome [BR:
carb03041
]
Common components
Common spliceosomal components
Cap binding complex
113714794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
113714794
NCBI-ProteinID:
XP_027094672
UniProt:
A0A6P6UVW7
LinkDB
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Position
10c:complement(11230830..11236572)
Genome browser
AA seq
258 aa
AA seq
DB search
MASLFKDLSKLSQYRDRRFTGSQEEFEQALLKSTTVYVGNMSFYTTEEQVYELFSRAGEI
KRIVMGLDKNSKTPCGFCFVMFYSREDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDAARGGYGKLVQRELEAQRQLVDYNAGSIGAGSLGSFPPVMPPQ
YGRHGGHHGYGGSHRHGRDYHRKRYREDDRRGPEFSKRNFDHESRRGSDHDSRPEKNPRF
RESGDSDDDEDEDRKQRH
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctttttaaggatcttagcaagctttcgcagtacagagaccggaggtttacg
gggtcacaggaagaattcgagcaagcattgctgaagtcgaccacggtttacgttgggaac
atgtcgttttacacgactgaggagcaggtttatgagttgttctcacgtgcaggagaaatt
aagaggatagtcatgggtttggataagaattctaaaactccttgtggtttctgctttgtc
atgttctactccagagaagatgctgaagactctgttaaatacataagtgggacaattctt
gatgatcgacctattcgtgtagattttgattggggttttcaagagggaaggcagtggggc
cgtggccgaagtggtggacaagtacgggatgaatatcgtactgattatgatgcagctaga
ggtggttatggaaaattggttcagagagagttggaggcacaaagacagctggtggactac
aatgcaggatcaataggcgcaggatcactaggctcttttccacctgtcatgccacctcaa
tatggtaggcatggtggacaccatggttatgggggttctcatcgacatggtcgagattac
catcgcaagcgatatcgtgaagatgaccgtcgtggaccagagttttcaaagagaaatttt
gaccatgaatctaggagaggttctgatcatgactctagaccggaaaagaatccccggttt
cgtgagagtggtgattccgatgacgacgaggatgaagatcgaaagcaacggcattaa
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integrated database retrieval system
