KEGG   Coffea arabica (coffee): 113715115
Entry
113715115         CDS       T11342                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
carb  Coffea arabica (coffee)
Pathway
carb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    113715115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:carb03009]
    113715115
Ribosome biogenesis [BR:carb03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    113715115
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-GeneID: 113715115
NCBI-ProteinID: XP_027095087
UniProt: A0A6P6UZR9
LinkDB
Position
10c:complement(51035243..51043517)
AA seq 582 aa
MNSQNHHSQHQKPTNNCQYNRGKNASDNSNSSKPNKSFFDIYGPEGRSDVVFKQPDANST
LNLQDVQGLVTWVLGDGFMPSWIFIKNKPLIPKVVMVYLPGLDAAMYLSQSKLLKGFKQC
CGIPRAVLALSCVSEGMQTIDALLTCKTKRKREATQSSVKKTCQTTEQGTYPSNSSGDPS
PTDALNNLPFPMTYYTLTAKELEDNGYCNRPDFCSTLPAPATPPYEILALDCEMCITREG
FELTRVTLVDVKGQVVLDKLIKPSNPIIDYNTRYSGITDEMLNGVTTTLKDIQEEFLQLV
YKETILVGHSLENDLLALKIFHDLVIDTAVLYKHPRGKSFKTALRVLSRRFLSREIQDSG
NGHDSIEDARATMELALLKIRHGPDFGSPPSFVRKKLLTVLGDYGKTSSIIDGISIVRRY
SSELSRSIVVSSDDDALSKARKEVRNDMVHFIWTQFAELNCYFMKQAEDTENVNKKLAEM
ISLLTCNQKPSGRKSIKCSITSELKDILCRMDERIRSLHSDLPLNSMLIICTGHGDTAIV
HRIRKTLSEQTETTLCRDKLVKVLEELQAQAEVGLCFVGVKH
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgaactctcaaaaccatcattcccaacatcaaaaacccactaataactgtcagtataat
agaggcaagaatgccagcgacaacagcaatagcagcaaacccaataagtccttctttgat
atatatggccctgaggggagatcggatgtagtttttaagcagccagatgccaattcgaca
ttgaatttgcaagatgtgcaagggcttgtcacctgggtgcttggtgacggattcatgcca
tcatggatttttatcaaaaacaaacccttgataccaaaagtcgttatggtgtatctccct
ggccttgatgcagctatgtacttatcgcagtccaaattactaaaaggttttaaacaatgt
tgtggcattcctcgagcagtattagctctcagttgtgtatcagagggaatgcagacaata
gatgcactgcttacctgcaaaaccaaaagaaagagggaagcaactcagtcctctgtgaaa
aaaacttgtcaaacaactgaacaaggaacttatccgtctaattcgtcaggggatccatcc
cccactgatgctctgaacaatctaccattcccaatgacatactacacactgacagctaag
gaattagaagataatgggtactgcaaccgaccagatttttgttcaactcttccagctcct
gcaactcctccatatgaaattttagctcttgactgtgagatgtgcattacaagggaaggg
ttcgaacttactcgagtgacacttgtagatgtcaaaggacaggttgtgttggacaaactc
attaaaccttctaatcccatcattgattataatactaggtacagtggaataacagatgag
atgttaaatggggtgacaacaactctaaaagacattcaggaggaatttctacaattggtt
tacaaagagactattcttgtgggccattcattggagaacgatttgttagcgctgaagata
tttcatgatttggtgattgacacagcagtgttatacaaacatccacgggggaaatctttc
aagacggccctacgtgtcctgagcaggagatttctttccagagagattcaggattcagga
aatggacatgatagtattgaagatgcaagagctacaatggaactggcattactgaagatt
agacatggacctgattttggttcacctccatcatttgtgcggaaaaagctcctcacggtt
ctgggtgactatggcaaaacctcctctataattgacggtatatctatagtgaggcgatat
tcctctgagctgtcccgttcaatagtagtgtcttcagatgatgatgctctttcaaaagcc
agaaaagaggtgagaaatgacatggtgcatttcatctggacgcaatttgcagagctaaat
tgctactttatgaaacaagcagaggacacagaaaatgtaaacaagaagctagctgagatg
atttctttgcttacatgtaaccagaagcctagtggaagaaaaagcatcaaatgcagcata
acctctgaactgaaggacattctttgtcgcatggatgagagaattagaagcctccattct
gatctacctttaaactccatgctcattatatgcacgggtcatggagacactgcaattgtt
catagaatacggaaaaccctttcggagcagactgagactacattatgccgagacaagctt
gtgaaagttttggaagagctgcaggcccaagctgaagtaggtctatgttttgtgggtgtg
aagcactaa

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