Coffea arabica (coffee): 113715115
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Entry
113715115 CDS
T11342
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113715115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113715115
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
RNases
113715115
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Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
113715115
NCBI-ProteinID:
XP_027095087
UniProt:
A0A6P6UZR9
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Position
10c:complement(51035243..51043517)
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AA seq
582 aa
AA seq
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MNSQNHHSQHQKPTNNCQYNRGKNASDNSNSSKPNKSFFDIYGPEGRSDVVFKQPDANST
LNLQDVQGLVTWVLGDGFMPSWIFIKNKPLIPKVVMVYLPGLDAAMYLSQSKLLKGFKQC
CGIPRAVLALSCVSEGMQTIDALLTCKTKRKREATQSSVKKTCQTTEQGTYPSNSSGDPS
PTDALNNLPFPMTYYTLTAKELEDNGYCNRPDFCSTLPAPATPPYEILALDCEMCITREG
FELTRVTLVDVKGQVVLDKLIKPSNPIIDYNTRYSGITDEMLNGVTTTLKDIQEEFLQLV
YKETILVGHSLENDLLALKIFHDLVIDTAVLYKHPRGKSFKTALRVLSRRFLSREIQDSG
NGHDSIEDARATMELALLKIRHGPDFGSPPSFVRKKLLTVLGDYGKTSSIIDGISIVRRY
SSELSRSIVVSSDDDALSKARKEVRNDMVHFIWTQFAELNCYFMKQAEDTENVNKKLAEM
ISLLTCNQKPSGRKSIKCSITSELKDILCRMDERIRSLHSDLPLNSMLIICTGHGDTAIV
HRIRKTLSEQTETTLCRDKLVKVLEELQAQAEVGLCFVGVKH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcaaaaccatcattcccaacatcaaaaacccactaataactgtcagtataat
agaggcaagaatgccagcgacaacagcaatagcagcaaacccaataagtccttctttgat
atatatggccctgaggggagatcggatgtagtttttaagcagccagatgccaattcgaca
ttgaatttgcaagatgtgcaagggcttgtcacctgggtgcttggtgacggattcatgcca
tcatggatttttatcaaaaacaaacccttgataccaaaagtcgttatggtgtatctccct
ggccttgatgcagctatgtacttatcgcagtccaaattactaaaaggttttaaacaatgt
tgtggcattcctcgagcagtattagctctcagttgtgtatcagagggaatgcagacaata
gatgcactgcttacctgcaaaaccaaaagaaagagggaagcaactcagtcctctgtgaaa
aaaacttgtcaaacaactgaacaaggaacttatccgtctaattcgtcaggggatccatcc
cccactgatgctctgaacaatctaccattcccaatgacatactacacactgacagctaag
gaattagaagataatgggtactgcaaccgaccagatttttgttcaactcttccagctcct
gcaactcctccatatgaaattttagctcttgactgtgagatgtgcattacaagggaaggg
ttcgaacttactcgagtgacacttgtagatgtcaaaggacaggttgtgttggacaaactc
attaaaccttctaatcccatcattgattataatactaggtacagtggaataacagatgag
atgttaaatggggtgacaacaactctaaaagacattcaggaggaatttctacaattggtt
tacaaagagactattcttgtgggccattcattggagaacgatttgttagcgctgaagata
tttcatgatttggtgattgacacagcagtgttatacaaacatccacgggggaaatctttc
aagacggccctacgtgtcctgagcaggagatttctttccagagagattcaggattcagga
aatggacatgatagtattgaagatgcaagagctacaatggaactggcattactgaagatt
agacatggacctgattttggttcacctccatcatttgtgcggaaaaagctcctcacggtt
ctgggtgactatggcaaaacctcctctataattgacggtatatctatagtgaggcgatat
tcctctgagctgtcccgttcaatagtagtgtcttcagatgatgatgctctttcaaaagcc
agaaaagaggtgagaaatgacatggtgcatttcatctggacgcaatttgcagagctaaat
tgctactttatgaaacaagcagaggacacagaaaatgtaaacaagaagctagctgagatg
atttctttgcttacatgtaaccagaagcctagtggaagaaaaagcatcaaatgcagcata
acctctgaactgaaggacattctttgtcgcatggatgagagaattagaagcctccattct
gatctacctttaaactccatgctcattatatgcacgggtcatggagacactgcaattgtt
catagaatacggaaaaccctttcggagcagactgagactacattatgccgagacaagctt
gtgaaagttttggaagagctgcaggcccaagctgaagtaggtctatgttttgtgggtgtg
aagcactaa
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