Coffea arabica (coffee): 113715147
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Entry
113715147 CDS
T11342
Name
(RefSeq) protein transport protein SEC24 C
KO
K14007
protein transport protein SEC24
Organism
carb Coffea arabica (coffee)
Pathway
carb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113715147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113715147
Membrane trafficking [BR:
carb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
113715147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
113715147
NCBI-ProteinID:
XP_027095162
UniProt:
A0A6P6UZZ4
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Position
10c
Genome browser
AA seq
1083 aa
AA seq
DB search
MASPGGPRPGNVPPNYNPNYLADNMQNLQINRPNQPPSTAGMNANAPRHPAPFGQQPPPF
AGGPPVSRPGPPPAGVLPRGQPPAGGPPQSTLPSNVGLNRPTGPPPMSQPPPPFASRPPP
PGYVPPIAGSTVPPPSGAVPPPGQGPLPGPLTSGPTFPPSSTAGLMSNGPPAFGSGPVQA
GPRAPPASTAPRFPMAGPPQTMYSSALQPPSMSSPFGSPPATASGGMAQSARPFLSEQPS
VPPPFGSSPFAQQGQVMPPPSGSAMHGWQMQHGQVAPPPSVPGSVQPPRMYGMPPPAGPV
LGQSMAHTGAAVSGQSKIDPNQIPRPIPSSSVILHETRQNNQANPPPPATSDYIVRDTGN
CSPRYMRCTINQVPCTVDLLNTSAMQMALLVQPMALPHPSEEPIQIVDFGEAGPVRCSHC
KAYINPFMKFIDQGRRYICNLCGATNETPREYQCNLGPDGRRRDADERPELCRGTVEFVA
TKEFTVRDPMPAVYFFLIDVSMNSIQTGATEAACSAISQVIADLPEGPRTMVGIATFDST
IHFYNLKRALQQPLMLIVPDVQDVYTPLESDVVVQLSECRQHLELLLESIPTMFQNNRTS
DSAFGAAVKAAFLAIKSTGGKLLVFQSVLPSVGIGALSAREAEGRTNISAGEKEAHKLLQ
PVDKTLKTMAIEFAEYQVSVDLFITTQSYMDIASISVIPRTTGGQVYYYYPFSALSDPAK
LANDLRWNITRPQGFEAVMRVRCSLGLQVQDYSGNFCKHIPTDVDLPAIDCDKTIMVTLK
HDDKLQDGSECAFQSALLYTTVYGQRRIRISTLSLPCTNMLSNLFRSADLDTQFGCMLKQ
AANEVPSTPLVQVREQVTNLCINILHSYRKFCATVTSPGQLILPEALKLLPLYTLALIKS
VGLRTDARVDDRSFWINYVAPLSVLLAIPLVYPRMIAIHDLGSKDSGEDLIPPSIPLSSE
HINDNGIYLLENGEDCLIYVGSNVDQDVMRQLLGFSSIDEVPTQFVLQQYDNPLSKKLNE
VMNEIRRQRCSYLRLRLCKKGDSSGMLFFSYMVEDKIQSGLSYVEFLVHVHRQIQNVFLP
LPH
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccaggggggcctaggccagggaatgtgccaccaaattacaaccctaattat
ttggctgataatatgcagaatttacaaatcaataggccgaaccaaccccctagcactgca
ggtatgaatgctaatgccccaagacatcctgctccatttggccaacagcccccacctttt
gcaggggggccaccagtatcccgtcctggtccaccccctgccggtgtccttccaagaggt
caaccgcctgctggtgggcccccacaatctacattgccttcaaatgttggtcttaataga
cccaccggtcctcctcctatgagtcagcctcctccgccttttgcttcgaggcctccacct
cccggctatgttcctccaattgctggctcaactgttcctccaccttctggtgctgttcca
cctccaggccagggcccccttcctgggcccctaacatcaggtcctacttttcctccctcg
agcactgctggcctgatgagcaatggaccacctgcatttgggtctggaccagtgcaggct
ggacctcgtgcaccacctgctagtactgcacctcgatttccaatggcaggtccaccgcaa
acaatgtattcctctgctctgcagcctccaagcatgagttcaccgtttggaagtccgcct
gctactgcatcaggtggtatggcacaatcagcccgtccatttctgtcagaacaaccaagc
gtcccacctccttttggttcctcaccatttgcgcaacaaggtcaagtgatgccaccgcct
tctggctcggccatgcatggatggcagatgcaacatgggcaggtggccccacctccgtca
gttcctggttcagtgcaaccacctagaatgtatggaatgccaccaccagctggtccagtt
cttggccaatcaatggctcatactggcgctgctgtatctggccaatccaaaattgaccct
aatcaaattccgcgtccaattcctagttcgtcagtgattctgcatgaaactcgtcaaaac
aatcaagcaaaccctcccccgcctgcaacaagtgactacattgttcgggacactggcaat
tgcagtccccgctacatgaggtgtactattaaccaggtcccttgtactgttgaccttttg
aatacatctgcaatgcagatggctttgctggtgcagcccatggccctccctcatccttct
gaggagccaatccagattgttgattttggcgaagctggtcctgttcgttgttctcattgc
aaagcttacattaatcctttcatgaaatttatagatcagggaaggcgttacatctgcaat
ttgtgtggagctacaaatgagactcctcgtgaatatcaatgcaatttaggtcctgatggt
aggcgtagagatgctgatgaaagacctgagctttgcagaggaacagttgaatttgttgca
actaaggaatttactgtgagggatccaatgcctgctgtatatttctttctcattgatgta
tcaatgaactcaatacagactggtgccactgaagcagcttgtagtgcaattagccaagtt
attgctgatcttcctgagggacctcgtacaatggtgggaatcgctacatttgattctacc
atccacttctacaatctaaaacgtgcattacagcagccattgatgctcatagtccctgat
gtgcaagatgtatatactcctcttgagagtgatgttgttgttcaactctctgagtgtcgt
caacatcttgagctgttactggagagtatcccgacaatgtttcagaataatagaacttct
gattccgcttttggtgctgcagtcaaggcagcatttttggcaatcaagagtactggaggc
aaacttcttgtatttcaatcagttttgccatctgttggcattggagccctttcagctaga
gaggcagaaggaaggactaatatatcagcaggggagaaggaggctcacaagttgctccag
cctgtggataaaactctgaaaaccatggctattgaatttgctgagtaccaagtctctgtt
gatttatttattacaactcaatcatacatggacattgcttctatatcagttatcccaaga
actacaggaggacaggtgtactattattacccattttctgcactttctgatccggctaag
cttgcaaacgatctccggtggaatattacaaggccacaaggctttgaggctgtaatgcgt
gttagatgcagcctgggtctccaagtccaggattattctggaaatttctgtaaacatatt
cctacagatgttgatctacctgcgattgattgtgacaaaacaatcatggtaactttaaaa
catgatgacaaattgcaggatggctctgaatgtgcttttcagtctgctcttctatacaca
actgtatatggtcaaagaagaatccgtatttcaactttgtctctgccatgtacaaacatg
ttgagcaatctgttccgctcagcagacttggatacacaatttggttgtatgttgaagcaa
gcggctaatgaagttccttctactccacttgtgcaagtaagagagcaagtaacaaacctt
tgtatcaacattctgcactcataccgtaaattctgtgccacagtaacatctcctggacag
ctcattctccctgaggcacttaaattattgcctctgtatacgcttgcattgatcaaaagc
gtggggttaagaactgatgctcgtgtagatgatagatccttttggataaattatgttgcc
cctctttctgttcttctggcaatccctctggtttatccacggatgatagctattcatgat
cttggctcaaaggattcgggagaggatctgattcctccttctattccactttccagtgag
catattaatgacaatggaatctatcttcttgagaatggtgaggattgcttgatttacgtt
ggatccaacgttgatcaagatgttatgcgacaacttttaggcttctcatccattgatgaa
gttcctactcagtttgtactgcagcagtatgacaatccgttgtcaaagaagttaaatgaa
gtaatgaatgagataaggcgccaaaggtgttcctatctccgcttgaggttatgcaagaaa
ggtgactcatcaggaatgttgttcttctcctacatggtagaagacaagatccagagtggc
ctgtcatacgttgagtttctagtacatgtccatcggcagatacaaaatgtgtttttgcca
ttacctcattga
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