Coffea arabica (coffee): 113715356
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Entry
113715356 CDS
T11342
Name
(RefSeq) AP-1 complex subunit gamma-2-like
KO
K12391
AP-1 complex subunit gamma-1
Organism
carb Coffea arabica (coffee)
Pathway
carb04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
113715356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113715356
Membrane trafficking [BR:
carb04131
]
Endosome - Golgi transport
Others
AP-1 complex
113715356
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
Cnd1
HEAT_GCN1
HEAT_2
XMAP215_CLASP_TOG
PDS5
U9-ORF
TPR_Atp25_C
Motif
Other DBs
NCBI-GeneID:
113715356
NCBI-ProteinID:
XP_027095343
UniProt:
A0A6P6UXQ6
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All DBs
Position
11c
Genome browser
AA seq
874 aa
AA seq
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MNPFSSGTRLRDMIRSIRGCKTAAEERAVVRKECAAIRAAVSENDQDYRHRNLAKLMFIH
MLGYPTHFGQMECLKSIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSIKQDLNHTNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCTIRIIRKVPDLAENFIN
SAASLLKEKHHGVLLTGVQLCTDLCKVSSEALEYFRKKCTEGVVKVLKDLANSPYAPEYD
IAGITDPFLHIRLLKFLRVLGQGDVDTSDCMNDILAQVATKTEPNKNAGNAILYECVATI
MSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMRAITVDSQAVQRHRATILECVKD
SDASIRKRALELVYVLVNESNVKPLTKELIDYLEVSEPEFRGDLTAKICSIVEKFSPEKI
WYIDQMLKVLSEAGNYVKDEVWHALIVVTTNASNLHGYAVRSLYRLVQTAGDQEILVRVA
VWCIGEYGDMLVNNTGFLDMEEPITVTESDAVDVVETAIKRHSSDLTSRAMCLVALLKLS
SRFPSCSVRINDVIVQYKGSLVLELQQRALEFSAIVDKHRNIRSTLVERMPVLDEATYSG
RRAGSVPAVVSTSQGAPINLPNGVAKTTSAPLVDLLDLSSDDVPVPSSSGGDFLQDLLGV
DLSPSLSQTDTNQAQKRGTDVLLDLLSIGTPPAQSNSSIPEMVSPSDDSKSAINVLEQLS
SPSAPAGGVSTPPGSSPMMDLLDGFAPKPENNVPAYPSIVAFESSTLQVTFNFSKQPGNQ
QTTIIEANFSNKTFDAYTDFIFQAAVPKFLQLHLDPASSDTLPASGNGSISQKLRITNSQ
HGKKSLVMRIRIGYKSNNKDMLEEGQINNFPRGL
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttttcgtccggcacgcgcctaagggacatgattcggtccattcgtggttgc
aagactgcagcggaggaacgtgctgttgtaagaaaagaatgtgcagctattcgtgctgca
gttagtgaaaatgatcaagattataggcatcgtaatcttgcaaaactcatgttcattcac
atgctgggataccctacacattttggacaaatggaatgtctgaaatcaattgcatctcct
ggatttcctgagaagagaataggctatcttggccttatgttgctccttgatgaaagacag
gaagttctgatgttggttacaaattccataaaacaagatcttaatcacaccaaccagtac
attgttggacttgctctttgtgctttggggaatatttgttctgcagaaatggctcgtgac
cttgctccagaagttgaacggcttctgcaatttagagatccaaacatccgaaagaaagca
gcattatgcactatcaggattatcaggaaagtgccagatctggcagaaaattttataaat
tctgccgcttctttgctgaaggaaaagcaccatggagttctccttacaggagtgcagctt
tgcacagatttatgcaaagtcagttcagaggcactcgaatatttcagaaagaaatgcaca
gagggtgtggtgaaagtgttgaaggatttggcgaatagtccatatgctccagaatatgac
attgcggggataactgacccttttcttcacataagattgctcaagtttttacgtgtactt
ggacagggagatgttgacactagtgattgcatgaatgatattcttgctcaggtggcaacc
aaaactgagccaaacaagaatgccgggaatgctatcctctacgaatgtgttgctaccatt
atgagtattgaagataatggtggcttgagggtccttgccatcaatatactgggtagattt
ttgtccaatcgtgacaacaatatcagatatgttgctttaaacatgctgatgagagctatt
acagtagatagtcaagcagtacagaggcatagagcaactatcttggagtgtgttaaggat
tcagatgcctcaatccgtaaaagggccctcgagcttgtgtatgttttggtaaatgaaagc
aatgtgaagcctttgaccaaggaactaattgattatttagaagtaagcgaaccagagttc
agaggagatcttactgccaaaatttgctcgattgtggagaagttttccccagagaaaatt
tggtacattgatcagatgctcaaggttctctcagaggctggaaattatgtcaaagatgaa
gtatggcacgctcttattgtcgttactacgaatgcttctaatcttcacggatatgctgta
aggtctttgtacagattagtccaaacagcaggtgatcaggaaattctcgttcgagttgca
gtttggtgcataggagagtatggtgatatgttggtcaataacactggattccttgatatg
gaggagccaataaccgtaacggagtcggatgctgtggatgttgtagagacagctatcaaa
cggcattcttcagatctcactagtcgggcaatgtgtctcgttgctttgttgaagctgtca
agtcgttttccatcttgttcagtgaggataaacgatgttattgttcagtataaaggaagc
ttggtgcttgaactacaacagagagcccttgagtttagtgcgattgttgataaacatcgg
aatattaggtctacactggtcgaaaggatgccagtccttgatgaggccacatatagtgga
aggagggctggttcagtgccagcagttgtttcaacttcacaaggcgctcctattaatctt
cctaatggagttgccaaaacgacatccgcaccactggttgatttgctggatcttagttca
gatgacgtaccagtacctagctcttctggtggagattttcttcaggatcttcttggtgtt
gatttgtcaccatctttgtcacaaacagacacaaatcaggcgcagaaaagaggcactgat
gtcctgctggatcttctatcaattgggacacctcctgctcaaagtaactcttctattcct
gagatggtttcccctagtgatgacagcaaaagtgctataaatgtcttggagcaattgtcc
tcaccttctgcgccagctggaggtgtatccacccctcctggaagttctcctatgatggat
ttgttggatggtttcgctccaaaacctgaaaacaatgttccagcttatccttcaattgtt
gcatttgagagcagcaccttgcaagtgacatttaacttttccaagcagcccggaaaccag
cagacgacaattattgaagctaacttttcaaataagacatttgatgcttatacggacttt
atcttccaggctgcagtgccaaagtttcttcaattacatttggatccagccagcagtgat
acacttcctgcaagtggtaatggatcaatctcccaaaaattgcgaattacgaacagccaa
catggcaagaaatcccttgttatgcgcatacggatagggtataagtcgaacaacaaagat
atgttggaggaagggcaaattaacaactttcctcgtggcttgtga
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