KEGG   Coffea arabica (coffee): 113715625
Entry
113715625         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein
  KO
K03505  DNA polymerase delta subunit 4
Organism
carb  Coffea arabica (coffee)
Pathway
carb03030  DNA replication
carb03410  Base excision repair
carb03420  Nucleotide excision repair
carb03430  Mismatch repair
carb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113715625
   03410 Base excision repair
    113715625
   03420 Nucleotide excision repair
    113715625
   03430 Mismatch repair
    113715625
   03440 Homologous recombination
    113715625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:carb03032]
    113715625
   03400 DNA repair and recombination proteins [BR:carb03400]
    113715625
DNA replication proteins [BR:carb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    113715625
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      113715625
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     113715625
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 113715625
NCBI-ProteinID: XP_027095677
UniProt: A0A6P6UY01
LinkDB
Position
11c:9812420..9815061
AA seq 126 aa
MATSKSDMKGFFKQKKKSGGITKAKAKSSSTKKSLSPKRSATYGSDITQPAALISHGSPD
IEDDYDEKEEVLRQFDMNMAYGPCLGMSRLARWERAKSLGMNPPEDIGHLLKAGKVGAEC
LWEGRV
NT seq 381 nt   +upstreamnt  +downstreamnt
atggcaacatcaaaatcagatatgaagggcttcttcaagcaaaagaagaagtctggtggc
ataacaaaggcgaaggccaaatcatcatctacaaagaaatctctgtctccaaagcgctca
gctacttatggctctgacatcactcaacctgctgctcttatctcacatggttctcctgac
attgaagatgattatgatgaaaaagaggaggttctcaggcaatttgacatgaacatggca
tacggaccatgccttgggatgagcaggcttgctcgctgggagcgtgccaaatccttgggc
atgaatcctcctgaagatatagggcatctcttgaaagctggcaaagttggagctgaatgt
ttgtgggaagggcgtgtttag

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