Coffea arabica (coffee): 113715625
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Entry
113715625 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K03505
DNA polymerase delta subunit 4
Organism
carb Coffea arabica (coffee)
Pathway
carb03030
DNA replication
carb03410
Base excision repair
carb03420
Nucleotide excision repair
carb03430
Mismatch repair
carb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113715625
03410 Base excision repair
113715625
03420 Nucleotide excision repair
113715625
03430 Mismatch repair
113715625
03440 Homologous recombination
113715625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
113715625
03400 DNA repair and recombination proteins [BR:
carb03400
]
113715625
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
113715625
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
113715625
MMR (mismatch excision repair)
DNA polymerase delta complex
113715625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_delta_4
Motif
Other DBs
NCBI-GeneID:
113715625
NCBI-ProteinID:
XP_027095677
UniProt:
A0A6P6UY01
LinkDB
All DBs
Position
11c:9812420..9815061
Genome browser
AA seq
126 aa
AA seq
DB search
MATSKSDMKGFFKQKKKSGGITKAKAKSSSTKKSLSPKRSATYGSDITQPAALISHGSPD
IEDDYDEKEEVLRQFDMNMAYGPCLGMSRLARWERAKSLGMNPPEDIGHLLKAGKVGAEC
LWEGRV
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcaaaatcagatatgaagggcttcttcaagcaaaagaagaagtctggtggc
ataacaaaggcgaaggccaaatcatcatctacaaagaaatctctgtctccaaagcgctca
gctacttatggctctgacatcactcaacctgctgctcttatctcacatggttctcctgac
attgaagatgattatgatgaaaaagaggaggttctcaggcaatttgacatgaacatggca
tacggaccatgccttgggatgagcaggcttgctcgctgggagcgtgccaaatccttgggc
atgaatcctcctgaagatatagggcatctcttgaaagctggcaaagttggagctgaatgt
ttgtgggaagggcgtgtttag
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