Coffea arabica (coffee): 113715842
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Entry
113715842 CDS
T11342
Name
(RefSeq) probable histone H2A variant 1
KO
K11251
histone H2A
Organism
carb Coffea arabica (coffee)
Pathway
carb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113715842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113715842
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113715842
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
113715842
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113715842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone
Histone_H2A_C
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
113715842
NCBI-ProteinID:
XP_027095946
UniProt:
A0A6P6UZS0
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Position
1e:53185816..53187714
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AA seq
141 aa
AA seq
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MAGKGGKGLLAGKTTAAAAAAAAASKEKEKKRPVSRSSRAGLQFPVGRIHRQLKSRTSAH
GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGT
IAGGGVIPHIHKSLINKTTKE
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaaggtgggaaggggcttttggccggaaagactaccgcagccgcagccgca
gccgcagcagccagcaaggaaaaggagaagaaaaggcccgtttcccgctcttcccgtgct
ggtcttcagtttcctgtgggtagaattcatcgccagctgaagtcgaggacatcggctcac
ggaagagttggcgccacagctgctgtttactctgctgcaatccttgaatatcttactgca
gaggtgcttgagttggctggaaatgcgagcaaagatctgaaagtgaagagaattactccc
aggcatctgcagttggccatccgcggggatgaggagcttgataccctcatcaagggaacc
attgctggcggtggtgtcatcccacacatccacaaatccctcatcaacaagaccaccaag
gaatga
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